Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP1BQ7LBR1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 AC005363.2-201ENST00000618631 242 ntBASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP1BQ7LBR1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 CCR12P-201ENST00000446203 998 ntBASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 AC097493.4-201ENST00000641197 219 ntBASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP1BQ7LBR1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP1BQ7LBR1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms