Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GDNFP39905 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.27■□□□□ 0.2
GDNFP39905 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GDNFP39905 AC134043.2-201ENST00000624206 2238 ntBASIC16.27■□□□□ 0.2
GDNFP39905 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GDNFP39905 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.27■□□□□ 0.2
GDNFP39905 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 SOX15-203ENST00000570788 1093 ntBASIC16.27■□□□□ 0.2
GDNFP39905 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.27■□□□□ 0.2
GDNFP39905 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.27■□□□□ 0.2
GDNFP39905 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.27■□□□□ 0.2
GDNFP39905 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDNFP39905 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.19
GDNFP39905 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.27■□□□□ 0.19
GDNFP39905 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.19
GDNFP39905 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GDNFP39905 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
GDNFP39905 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.27■□□□□ 0.19
GDNFP39905 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GDNFP39905 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
GDNFP39905 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GDNFP39905 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.27■□□□□ 0.19
GDNFP39905 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 RPS2P52-201ENST00000469610 820 ntBASIC16.26■□□□□ 0.19
GDNFP39905 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.26■□□□□ 0.19
GDNFP39905 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.26■□□□□ 0.19
GDNFP39905 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.26■□□□□ 0.19
GDNFP39905 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.26■□□□□ 0.19
GDNFP39905 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GDNFP39905 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.26■□□□□ 0.19
GDNFP39905 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.26■□□□□ 0.19
GDNFP39905 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDNFP39905 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GDNFP39905 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GDNFP39905 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GDNFP39905 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.25■□□□□ 0.19
GDNFP39905 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.25■□□□□ 0.19
GDNFP39905 RNA5SP413-201ENST00000516373 109 ntBASIC16.25■□□□□ 0.19
GDNFP39905 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.25■□□□□ 0.19
GDNFP39905 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GDNFP39905 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GDNFP39905 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 TFP1-202ENST00000475455 1573 ntBASIC16.25■□□□□ 0.19
GDNFP39905 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms