Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 NEFHP1-201ENST00000412845 2629 ntBASIC17.83■□□□□ 0.44
FOXE1O00358 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.83■□□□□ 0.44
FOXE1O00358 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXE1O00358 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXE1O00358 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 AC092338.2-201ENST00000568827 1415 ntBASIC17.82■□□□□ 0.44
FOXE1O00358 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXE1O00358 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXE1O00358 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 MIR1238-201ENST00000408483 83 ntBASIC17.82■□□□□ 0.44
FOXE1O00358 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXE1O00358 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 MIR4674-201ENST00000582457 87 ntBASIC17.82■□□□□ 0.44
FOXE1O00358 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXE1O00358 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXE1O00358 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
FOXE1O00358 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXE1O00358 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.81■□□□□ 0.44
FOXE1O00358 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXE1O00358 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXE1O00358 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 AP003041.3-201ENST00000527151 707 ntBASIC17.81■□□□□ 0.44
FOXE1O00358 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXE1O00358 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXE1O00358 C2orf69P3-201ENST00000565542 1120 ntBASIC17.81■□□□□ 0.44
FOXE1O00358 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXE1O00358 AC116562.4-202ENST00000641738 218 ntBASIC17.81■□□□□ 0.44
FOXE1O00358 AL162741.1-201ENST00000565563 1558 ntBASIC17.81■□□□□ 0.44
FOXE1O00358 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXE1O00358 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FOXE1O00358 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXE1O00358 TSPY14P-201ENST00000303979 915 ntBASIC17.8■□□□□ 0.44
FOXE1O00358 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.8■□□□□ 0.44
FOXE1O00358 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
FOXE1O00358 AL390955.1-201ENST00000428694 934 ntBASIC17.8■□□□□ 0.44
FOXE1O00358 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXE1O00358 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXE1O00358 BX088651.1-201ENST00000540551 451 ntBASIC17.8■□□□□ 0.44
FOXE1O00358 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXE1O00358 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXE1O00358 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
FOXE1O00358 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXE1O00358 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXE1O00358 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXE1O00358 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXE1O00358 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXE1O00358 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXE1O00358 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXE1O00358 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXE1O00358 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FOXE1O00358 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXE1O00358 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXE1O00358 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms