Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 AC006449.5-201ENST00000610658 2098 ntBASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CICP20-201ENST00000443330 2801 ntBASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 KRT18P10-201ENST00000388836 1287 ntBASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 SMPD5-203ENST00000639008 1464 ntBASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 AC107918.4-201ENST00000641966 3141 ntBASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CYSTM1Q9H1C7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 DPP3P2-201ENST00000416030 1696 ntBASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 AC025884.2-201ENST00000553429 711 ntBASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 AC006077.2-201ENST00000623591 457 ntBASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms