Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 HLA-G-202ENST00000376815 851 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 HLA-G-203ENST00000376818 1127 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 KRT18P68-201ENST00000392293 1000 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 AL355472.2-201ENST00000422958 438 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 HLA-B-256ENST00000639848 1089 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 FLJ16779-201ENST00000612722 7638 ntBASIC16.28■□□□□ 0.2
C11orf88Q6PI97 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf88Q6PI97 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 AC026366.1-201ENST00000488803 879 ntBASIC16.27■□□□□ 0.2
C11orf88Q6PI97 UNC93B5-201ENST00000530315 699 ntBASIC16.27■□□□□ 0.2
C11orf88Q6PI97 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms