Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC9A3P48764 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC9A3P48764 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SLC9A3P48764 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC9A3P48764 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC9A3P48764 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC9A3P48764 AC233263.1-201ENST00000578059 224 ntBASIC17.16■□□□□ 0.34
SLC9A3P48764 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SLC9A3P48764 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 KRT8P41-201ENST00000533985 1514 ntBASIC17.16■□□□□ 0.34
SLC9A3P48764 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SLC9A3P48764 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC9A3P48764 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC9A3P48764 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 KRASP1-201ENST00000407852 552 ntBASIC17.15■□□□□ 0.34
SLC9A3P48764 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC9A3P48764 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC9A3P48764 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC9A3P48764 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC9A3P48764 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC9A3P48764 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC9A3P48764 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC9A3P48764 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC9A3P48764 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC9A3P48764 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SLC9A3P48764 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 ANO7L1-203ENST00000602586 1720 ntBASIC17.14■□□□□ 0.33
SLC9A3P48764 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC9A3P48764 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.14■□□□□ 0.33
SLC9A3P48764 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC9A3P48764 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 AL023875.1-201ENST00000640777 796 ntBASIC17.14■□□□□ 0.33
SLC9A3P48764 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC9A3P48764 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC9A3P48764 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC9A3P48764 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC9A3P48764 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms