Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LMNAP02545 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.53■□□□□ 0.72
LMNAP02545 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.53■□□□□ 0.72
LMNAP02545 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.53■□□□□ 0.72
LMNAP02545 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.53■□□□□ 0.72
LMNAP02545 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 KRT18P38-201ENST00000449496 1282 ntBASIC19.53■□□□□ 0.72
LMNAP02545 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.53■□□□□ 0.72
LMNAP02545 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LMNAP02545 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 AC120498.9-201ENST00000339021 3867 ntBASIC19.53■□□□□ 0.72
LMNAP02545 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LMNAP02545 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LMNAP02545 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.53■□□□□ 0.72
LMNAP02545 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.53■□□□□ 0.72
LMNAP02545 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMNAP02545 RCC2P6-201ENST00000526625 1557 ntBASIC19.53■□□□□ 0.72
LMNAP02545 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.52■□□□□ 0.72
LMNAP02545 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.52■□□□□ 0.72
LMNAP02545 TMEM179-206ENST00000616017 1645 ntBASIC19.52■□□□□ 0.72
LMNAP02545 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.52■□□□□ 0.72
LMNAP02545 ZNF444P1-201ENST00000559497 298 ntBASIC19.52■□□□□ 0.72
LMNAP02545 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
LMNAP02545 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMNAP02545 AC090340.1-201ENST00000620778 4980 ntBASIC19.52■□□□□ 0.72
LMNAP02545 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LMNAP02545 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
LMNAP02545 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.71
LMNAP02545 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LMNAP02545 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 KRT8P36-201ENST00000489121 1440 ntBASIC19.51■□□□□ 0.71
LMNAP02545 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LMNAP02545 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.51■□□□□ 0.71
LMNAP02545 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.51■□□□□ 0.71
LMNAP02545 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LMNAP02545 AL022342.1-201ENST00000400363 863 ntBASIC19.51■□□□□ 0.71
LMNAP02545 AC004951.3-201ENST00000418645 1148 ntBASIC19.51■□□□□ 0.71
LMNAP02545 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.51■□□□□ 0.71
LMNAP02545 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
LMNAP02545 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LMNAP02545 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LMNAP02545 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.51■□□□□ 0.71
LMNAP02545 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.51■□□□□ 0.71
LMNAP02545 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.51■□□□□ 0.71
LMNAP02545 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LMNAP02545 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMNAP02545 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.51■□□□□ 0.71
LMNAP02545 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.5■□□□□ 0.71
LMNAP02545 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LMNAP02545 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LMNAP02545 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LMNAP02545 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.5■□□□□ 0.71
LMNAP02545 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.5■□□□□ 0.71
LMNAP02545 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.5■□□□□ 0.71
LMNAP02545 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMNAP02545 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms