Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PFDN1O60925 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
PFDN1O60925 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.78■□□□□ 0.28
PFDN1O60925 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 THA1P-201ENST00000590384 1145 ntBASIC16.78■□□□□ 0.28
PFDN1O60925 SNX5-217ENST00000606557 1087 ntBASIC16.78■□□□□ 0.28
PFDN1O60925 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.78■□□□□ 0.28
PFDN1O60925 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN1O60925 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.78■□□□□ 0.28
PFDN1O60925 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PFDN1O60925 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PFDN1O60925 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PFDN1O60925 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN1O60925 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN1O60925 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PFDN1O60925 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.28
PFDN1O60925 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.77■□□□□ 0.28
PFDN1O60925 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
PFDN1O60925 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN1O60925 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.77■□□□□ 0.28
PFDN1O60925 DUX4L9-201ENST00000449051 1259 ntBASIC16.77■□□□□ 0.28
PFDN1O60925 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.77■□□□□ 0.28
PFDN1O60925 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.77■□□□□ 0.27
PFDN1O60925 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PFDN1O60925 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
PFDN1O60925 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
PFDN1O60925 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.77■□□□□ 0.27
PFDN1O60925 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PFDN1O60925 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PFDN1O60925 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 AP006587.3-201ENST00000525742 1516 ntBASIC16.76■□□□□ 0.27
PFDN1O60925 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.76■□□□□ 0.27
PFDN1O60925 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.76■□□□□ 0.27
PFDN1O60925 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.76■□□□□ 0.27
PFDN1O60925 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PFDN1O60925 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PFDN1O60925 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.76■□□□□ 0.27
PFDN1O60925 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PFDN1O60925 PP12613-201ENST00000424958 2230 ntBASIC16.76■□□□□ 0.27
PFDN1O60925 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PFDN1O60925 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PFDN1O60925 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PFDN1O60925 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms