Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 AC128676.1-201ENST00000454392 318 ntBASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 AC233263.1-201ENST00000578059 224 ntBASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 RN7SL471P-201ENST00000580476 299 ntBASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 MIR4651-201ENST00000582622 73 ntBASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.71□□□□□ -0.21
HHLA3Q9XRX5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.71□□□□□ -0.22
HHLA3Q9XRX5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 KRASP1-201ENST00000407852 552 ntBASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HHLA3Q9XRX5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms