Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.081e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.97□□□□□ -1.131e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-207ENST00000506985 2399 ntTSL 1 (best)6.49□□□□□ -1.371e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-205ENST00000505388 606 ntTSL 44.32□□□□□ -1.721e-11■■■□□ 18.1
XRN2Q9H0D6 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.8□□□□□ -0.361e-7■■■□□ 18.1
XRN2Q9H0D6 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.721e-7■■■□□ 18.1
XRN2Q9H0D6 LEMD2-203ENST00000442696 839 ntTSL 526.27■■□□□ 1.83e-6■■■□□ 18
XRN2Q9H0D6 LEMD2-202ENST00000421671 2323 ntTSL 321.56■■□□□ 1.043e-6■■■□□ 18
XRN2Q9H0D6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.533e-6■■■□□ 18
XRN2Q9H0D6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.443e-6■■■□□ 18
XRN2Q9H0D6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.138e-8■■■□□ 18
XRN2Q9H0D6 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.12□□□□□ -0.478e-8■■■□□ 18
XRN2Q9H0D6 HSP90AA1-203ENST00000553585 581 ntTSL 37.37□□□□□ -1.238e-8■■■□□ 18
XRN2Q9H0D6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.394e-8■■■□□ 18
XRN2Q9H0D6 ARHGAP32-204ENST00000525234 719 ntTSL 337.52■■■■□ 3.61e-5■■■□□ 18
XRN2Q9H0D6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.89■■■□□ 2.861e-5■■■□□ 18
XRN2Q9H0D6 FBXL3-202ENST00000417323 1093 ntTSL 532.64■■■□□ 2.821e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.765e-8■■■□□ 18
XRN2Q9H0D6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.751e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.57■■■□□ 2.641e-5■■■□□ 18
XRN2Q9H0D6 STK40-208ENST00000482458 900 ntTSL 331.15■■■□□ 2.582e-15■■■□□ 18
XRN2Q9H0D6 FBXL3-204ENST00000472949 329 ntTSL 530.97■■■□□ 2.551e-5■■■□□ 18
XRN2Q9H0D6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.441e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.335e-8■■■□□ 18
XRN2Q9H0D6 TOMM40-205ENST00000589649 731 ntTSL 229.51■■■□□ 2.315e-8■■■□□ 18
XRN2Q9H0D6 CERS4-203ENST00000558268 713 ntTSL 329.45■■■□□ 2.311e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.295e-8■■■□□ 18
XRN2Q9H0D6 PPP2R3B-203ENST00000445792 1998 ntTSL 229.11■■■□□ 2.251e-5■■■□□ 18
XRN2Q9H0D6 ITPK1-203ENST00000553452 609 ntTSL 529.05■■■□□ 2.241e-5■■■□□ 18
XRN2Q9H0D6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.241e-5■■■□□ 18
XRN2Q9H0D6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.245e-8■■■□□ 18
XRN2Q9H0D6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.245e-8■■■□□ 18
XRN2Q9H0D6 RHBDD3-203ENST00000413137 1555 ntTSL 529■■■□□ 2.231e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.185e-8■■■□□ 18
XRN2Q9H0D6 RHBDD3-206ENST00000493894 999 ntTSL 228.54■■■□□ 2.161e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.49■■■□□ 2.151e-5■■■□□ 18
XRN2Q9H0D6 MPP6-206ENST00000432190 982 ntTSL 328.35■■■□□ 2.135e-8■■■□□ 18
XRN2Q9H0D6 TBCB-202ENST00000392178 791 ntTSL 228.26■■■□□ 2.111e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.085e-8■■■□□ 18
XRN2Q9H0D6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.83■■■□□ 2.055e-8■■■□□ 18
XRN2Q9H0D6 RHBDD3-205ENST00000488106 640 ntTSL 527.81■■■□□ 2.041e-5■■■□□ 18
XRN2Q9H0D6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.048e-7■■■□□ 18
XRN2Q9H0D6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.022e-10■■■□□ 18
XRN2Q9H0D6 NKIRAS2-210ENST00000485789 997 ntTSL 227.31■■□□□ 1.961e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.31■■□□□ 1.961e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.945e-8■■■□□ 18
XRN2Q9H0D6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.09■■□□□ 1.932e-15■■■□□ 18
XRN2Q9H0D6 ST20-MTHFS-202ENST00000494999 632 ntTSL 326.89■■□□□ 1.92e-10■■■□□ 18
XRN2Q9H0D6 KLF16-202ENST00000541015 1134 ntTSL 1 (best)26.85■■□□□ 1.891e-5■■■□□ 18
XRN2Q9H0D6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.875e-8■■■□□ 18
XRN2Q9H0D6 HMGB2-204ENST00000506267 629 ntTSL 326.58■■□□□ 1.853e-9■■■□□ 18
XRN2Q9H0D6 RHBDD3-204ENST00000414672 900 ntTSL 526.53■■□□□ 1.841e-5■■■□□ 18
XRN2Q9H0D6 CHRD-217ENST00000496527 588 ntTSL 426.51■■□□□ 1.835e-6■■■□□ 18
XRN2Q9H0D6 RRP1-204ENST00000475534 588 ntTSL 326.3■■□□□ 1.81e-5■■■□□ 18
XRN2Q9H0D6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.08■■□□□ 1.771e-5■■■□□ 18
XRN2Q9H0D6 PRKRA-207ENST00000463882 541 ntTSL 225.94■■□□□ 1.741e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-204ENST00000528306 552 ntTSL 425.92■■□□□ 1.741e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-205ENST00000466367 866 ntTSL 1 (best)25.91■■□□□ 1.741e-5■■■□□ 18
XRN2Q9H0D6 PRKRA-205ENST00000457633 942 ntTSL 325.88■■□□□ 1.731e-5■■■□□ 18
XRN2Q9H0D6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.735e-8■■■□□ 18
XRN2Q9H0D6 GLI4-204ENST00000517530 563 ntTSL 225.73■■□□□ 1.711e-5■■■□□ 18
XRN2Q9H0D6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.711e-5■■■□□ 18
XRN2Q9H0D6 CHID1-216ENST00000529539 602 ntTSL 225.48■■□□□ 1.675e-8■■■□□ 18
XRN2Q9H0D6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.671e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-202ENST00000419386 829 ntTSL 325.46■■□□□ 1.671e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61e-5■■■□□ 18
XRN2Q9H0D6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.08■■□□□ 1.65e-8■■■□□ 18
XRN2Q9H0D6 ARRDC1-204ENST00000461627 882 ntTSL 225.02■■□□□ 1.61e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-207ENST00000471125 612 ntTSL 325.02■■□□□ 1.61e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-214ENST00000481266 970 ntTSL 524.98■■□□□ 1.591e-5■■■□□ 18
XRN2Q9H0D6 CHRD-207ENST00000459711 503 ntTSL 224.84■■□□□ 1.575e-6■■■□□ 18
XRN2Q9H0D6 PRKRA-202ENST00000424699 1616 ntTSL 224.8■■□□□ 1.561e-5■■■□□ 18
XRN2Q9H0D6 PPP2R3B-201ENST00000381625 782 ntTSL 524.73■■□□□ 1.551e-5■■■□□ 18
XRN2Q9H0D6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.541e-5■■■□□ 18
XRN2Q9H0D6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.67■■□□□ 1.541e-5■■■□□ 18
XRN2Q9H0D6 GLI4-209ENST00000522479 435 ntTSL 324.66■■□□□ 1.541e-5■■■□□ 18
XRN2Q9H0D6 PLK3-202ENST00000461358 767 ntTSL 524.64■■□□□ 1.541e-5■■■□□ 18
XRN2Q9H0D6 FPGS-218ENST00000489522 561 ntTSL 524.63■■□□□ 1.531e-5■■■□□ 18
XRN2Q9H0D6 CD99-208ENST00000482405 842 ntTSL 224.48■■□□□ 1.511e-5■■■□□ 18
XRN2Q9H0D6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.511e-5■■■□□ 18
XRN2Q9H0D6 NEK3-202ENST00000550841 569 ntTSL 424.45■■□□□ 1.51e-5■■■□□ 18
XRN2Q9H0D6 IPO4-204ENST00000558193 555 ntTSL 424.43■■□□□ 1.55e-8■■■□□ 18
XRN2Q9H0D6 PKD1-221ENST00000488185 737 ntTSL 524.27■■□□□ 1.481e-5■■■□□ 18
XRN2Q9H0D6 WDR45B-203ENST00000571817 889 ntTSL 324.24■■□□□ 1.471e-5■■■□□ 18
XRN2Q9H0D6 STK40-205ENST00000460017 511 ntTSL 524.16■■□□□ 1.462e-15■■■□□ 18
XRN2Q9H0D6 PI4KA-215ENST00000485963 2301 ntTSL 224.16■■□□□ 1.461e-5■■■□□ 18
XRN2Q9H0D6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.13■■□□□ 1.451e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-218ENST00000491334 546 ntTSL 224.13■■□□□ 1.451e-5■■■□□ 18
XRN2Q9H0D6 FPGS-210ENST00000473536 347 ntTSL 324.12■■□□□ 1.451e-5■■■□□ 18
XRN2Q9H0D6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.442e-15■■■□□ 18
XRN2Q9H0D6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.431e-5■■■□□ 18
XRN2Q9H0D6 CHRD-203ENST00000356534 1252 ntTSL 1 (best)23.95■■□□□ 1.425e-6■■■□□ 18
XRN2Q9H0D6 DDX41-202ENST00000503078 2375 ntTSL 223.92■■□□□ 1.421e-5■■■□□ 18
XRN2Q9H0D6 FOXN3-211ENST00000555855 851 ntTSL 523.92■■□□□ 1.421e-5■■■□□ 18
XRN2Q9H0D6 FPGS-208ENST00000467826 829 ntTSL 523.83■■□□□ 1.411e-5■■■□□ 18
XRN2Q9H0D6 CPE-203ENST00000480404 437 ntTSL 223.79■■□□□ 1.45e-8■■■□□ 18
XRN2Q9H0D6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.41e-5■■■□□ 18
XRN2Q9H0D6 TBC1D9B-209ENST00000519757 1208 ntTSL 223.7■■□□□ 1.381e-5■■■□□ 18
XRN2Q9H0D6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.381e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-214ENST00000587337 563 ntTSL 423.59■■□□□ 1.371e-5■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 135.2 ms