RNA–Protein interactions for RNA: ENST00000475534.5

RRP1-204, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-204ENST00000475534 NISCHQ9Y2I1 1504 aa54.19■■■■■ 6.26
RRP1-204ENST00000475534 CCDC180Q9P1Z9 1646 aa48.29■■■■■ 5.32
RRP1-204ENST00000475534 ABCC9O60706 1549 aa47.79■■■■■ 5.24
RRP1-204ENST00000475534 RB1CC1Q8TDY2 1594 aa45.74■■■■■ 4.91
RRP1-204ENST00000475534 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
RRP1-204ENST00000475534 NACADO15069 1562 aa45.56■■■■■ 4.88
RRP1-204ENST00000475534 MYO15BQ96JP2 1530 aa45.09■■■■■ 4.81
RRP1-204ENST00000475534 ZCCHC6Q5VYS8 1495 aaKnown RBP45.02■■■■■ 4.8
RRP1-204ENST00000475534 DCAF1Q9Y4B6 1507 aa44.75■■■■■ 4.76
RRP1-204ENST00000475534 PABPN1Q86U42 306 aaKnown RBP eCLIP44.65■■■■■ 4.74
RRP1-204ENST00000475534 UNC13AQ9UPW8 1703 aa44.54■■■■■ 4.72
RRP1-204ENST00000475534 BICRAQ9NZM4 1560 aa44.28■■■■■ 4.68
RRP1-204ENST00000475534 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
RRP1-204ENST00000475534 SCRIBQ14160 1630 aa44.12■■■■■ 4.65
RRP1-204ENST00000475534 SHROOM4Q9ULL8 1493 aa43.8■■■■■ 4.6
RRP1-204ENST00000475534 EIF4G1Q04637 1599 aaKnown RBP43.2■■■■■ 4.51
RRP1-204ENST00000475534 CC2D2AQ9P2K1 1620 aa43.13■■■■■ 4.49
RRP1-204ENST00000475534 CECR2Q9BXF3 1484 aa42.97■■■■■ 4.47
RRP1-204ENST00000475534 SMARCA4P51532 1647 aa42.11■■■■■ 4.33
RRP1-204ENST00000475534 NCAPD3P42695 1498 aa42.05■■■■■ 4.32
RRP1-204ENST00000475534 BAZ1AQ9NRL2 1556 aaPredicted RBP42.04■■■■■ 4.32
RRP1-204ENST00000475534 ATAD2BQ9ULI0 1458 aa42.02■■■■■ 4.32
RRP1-204ENST00000475534 SMARCA2P51531 1590 aa41.96■■■■■ 4.31
RRP1-204ENST00000475534 HMGXB3Q12766 1538 aa41.77■■■■■ 4.28
RRP1-204ENST00000475534 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.27
RRP1-204ENST00000475534 BAZ1BQ9UIG0 1483 aaKnown RBP41.7■■■■■ 4.27
RRP1-204ENST00000475534 PEG3Q9GZU2 1588 aa41.65■■■■■ 4.26
RRP1-204ENST00000475534 ERCC6Q03468 1493 aa41.28■■■■■ 4.2
RRP1-204ENST00000475534 WIZO95785 1651 aa41.27■■■■■ 4.2
RRP1-204ENST00000475534 NESP48681 1621 aa41.19■■■■■ 4.18
RRP1-204ENST00000475534 RSF1Q96T23 1441 aaPredicted RBP41.16■■■■■ 4.18
RRP1-204ENST00000475534 LAMC3Q9Y6N6 1575 aa41■■■■■ 4.15
RRP1-204ENST00000475534 CUX2O14529 1486 aa40.89■■■■■ 4.14
RRP1-204ENST00000475534 CADPSQ9ULU8 1353 aa40.86■■■■■ 4.13
RRP1-204ENST00000475534 PDS5BQ9NTI5 1447 aa40.83■■■■■ 4.13
RRP1-204ENST00000475534 TOP2AP11388 1531 aaKnown RBP40.82■■■■■ 4.12
RRP1-204ENST00000475534 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
RRP1-204ENST00000475534 THOC2Q8NI27 1593 aaKnown RBP40.57■■■■■ 4.08
RRP1-204ENST00000475534 CFTRP13569 1480 aa40.48■■■■■ 4.07
RRP1-204ENST00000475534 CCDC88BA6NC98 1476 aa40.39■■■■■ 4.06
RRP1-204ENST00000475534 FANCD2Q9BXW9 1451 aa40.39■■■■■ 4.06
RRP1-204ENST00000475534 MRC2Q9UBG0 1479 aa40.39■■■■■ 4.06
RRP1-204ENST00000475534 CEP164Q9UPV0 1460 aa40.39■■■■■ 4.06
RRP1-204ENST00000475534 WDR62O43379 1518 aa40.21■■■■■ 4.03
RRP1-204ENST00000475534 DNAJC5Q9H3Z4 198 aa40.17■■■■■ 4.02
RRP1-204ENST00000475534 PRDM2Q13029 1718 aa40.02■■■■■ 4
RRP1-204ENST00000475534 SUPT5HO00267 1087 aaKnown RBP40■■■■□ 3.99
RRP1-204ENST00000475534 URB2Q14146 1524 aaKnown RBP39.96■■■■□ 3.99
RRP1-204ENST00000475534 ABCC8Q09428 1581 aa39.67■■■■□ 3.94
RRP1-204ENST00000475534 TOPBP1Q92547 1522 aa39.66■■■■□ 3.94
RRP1-204ENST00000475534 DNMBPQ6XZF7 1577 aa39.57■■■■□ 3.92
RRP1-204ENST00000475534 IFT140Q96RY7 1462 aa39.54■■■■□ 3.92
RRP1-204ENST00000475534 ZNF608Q9ULD9 1512 aaPredicted RBP39.38■■■■□ 3.89
RRP1-204ENST00000475534 POLA1P09884 1462 aaPredicted RBP39.3■■■■□ 3.88
RRP1-204ENST00000475534 OSCARQ8IYS5 282 aa39.24■■■■□ 3.87
RRP1-204ENST00000475534 SOGA1O94964 1423 aa39.21■■■■□ 3.87
RRP1-204ENST00000475534 TARBP1Q13395 1621 aaKnown RBP39.21■■■■□ 3.87
RRP1-204ENST00000475534 CUX1P39880 1505 aa39.19■■■■□ 3.86
RRP1-204ENST00000475534 FGD5Q6ZNL6 1462 aa39.17■■■■□ 3.86
RRP1-204ENST00000475534 RAD54L2Q9Y4B4 1467 aa39.17■■■■□ 3.86
RRP1-204ENST00000475534 EIF4G3O43432 1585 aaKnown RBP39.16■■■■□ 3.86
RRP1-204ENST00000475534 AQRO60306 1485 aaKnown RBP eCLIP39.15■■■■□ 3.863e-13■■■■■ 31.6
RRP1-204ENST00000475534 TDRD9Q8NDG6 1382 aaKnown RBP39.05■■■■□ 3.84
RRP1-204ENST00000475534 FBLN2P98095 1184 aa38.92■■■■□ 3.82
RRP1-204ENST00000475534 WDR97A6NE52 1622 aa38.87■■■■□ 3.81
RRP1-204ENST00000475534 WRNQ14191 1432 aaPredicted RBP eCLIP38.86■■■■□ 3.81
RRP1-204ENST00000475534 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
RRP1-204ENST00000475534 GRIN2BQ13224 1484 aa38.76■■■■□ 3.8
RRP1-204ENST00000475534 SNAPC4Q5SXM2 1469 aa38.76■■■■□ 3.8
RRP1-204ENST00000475534 TOP2BQ02880 1626 aa38.74■■■■□ 3.79
RRP1-204ENST00000475534 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
RRP1-204ENST00000475534 CHD1O14646 1710 aa38.72■■■■□ 3.79
RRP1-204ENST00000475534 GAPVD1Q14C86 1478 aa38.72■■■■□ 3.79
RRP1-204ENST00000475534 BIVM-ERCC5R4GMW8 1640 aa38.71■■■■□ 3.79
RRP1-204ENST00000475534 SYNJ1O43426 1573 aa38.7■■■■□ 3.79
RRP1-204ENST00000475534 CHMP7Q8WUX9 453 aaPredicted RBP38.7■■■■□ 3.79
RRP1-204ENST00000475534 MAGI1Q96QZ7 1491 aaPredicted RBP38.67■■■■□ 3.78
RRP1-204ENST00000475534 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
RRP1-204ENST00000475534 PBRM1Q86U86 1689 aa38.55■■■■□ 3.76
RRP1-204ENST00000475534 SYNJ2O15056 1496 aa38.54■■■■□ 3.76
RRP1-204ENST00000475534 RIMBP3CA6NJZ7 1639 aa38.52■■■■□ 3.76
RRP1-204ENST00000475534 RIMBP3BA6NNM3 1639 aa38.52■■■■□ 3.76
RRP1-204ENST00000475534 RIMBP3Q9UFD9 1639 aa38.52■■■■□ 3.76
RRP1-204ENST00000475534 ARHGEF11O15085 1522 aa38.49■■■■□ 3.75
RRP1-204ENST00000475534 CLASP1Q7Z460 1538 aa38.3■■■■□ 3.72
RRP1-204ENST00000475534 CYB5RLQ6IPT4 315 aa38.3■■■■□ 3.72
RRP1-204ENST00000475534 ERICH3Q5RHP9 1530 aa38.27■■■■□ 3.72
RRP1-204ENST00000475534 FHAD1B1AJZ9 1412 aa38.25■■■■□ 3.71
RRP1-204ENST00000475534 ADAMTS12P58397 1594 aa38.25■■■■□ 3.71
RRP1-204ENST00000475534 GRIN2AQ12879 1464 aa38.24■■■■□ 3.71
RRP1-204ENST00000475534 ARAP1Q96P48 1450 aa38.14■■■■□ 3.7
RRP1-204ENST00000475534 KIF27Q86VH2 1401 aa38.11■■■■□ 3.69
RRP1-204ENST00000475534 NUP160Q12769 1436 aa38.05■■■■□ 3.68
RRP1-204ENST00000475534 CEP170Q5SW79 1584 aa38.02■■■■□ 3.68
RRP1-204ENST00000475534 IGF1RP08069 1367 aa37.96■■■■□ 3.67
RRP1-204ENST00000475534 CUL7Q14999 1698 aa37.82■■■■□ 3.65
RRP1-204ENST00000475534 JPH4Q96JJ6 628 aa37.78■■■■□ 3.64
RRP1-204ENST00000475534 ERCC6L2Q5T890 1561 aa37.77■■■■□ 3.64
RRP1-204ENST00000475534 CARMIL1Q5VZK9 1371 aa37.77■■■■□ 3.64
RRP1-204ENST00000475534 SHROOM2Q13796 1616 aa37.76■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms