RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-218ENST00000491334 NISCHQ9Y2I1 1504 aa48.96■■■■■ 5.43
CDK5RAP2-218ENST00000491334 ABCC9O60706 1549 aa44.93■■■■■ 4.78
CDK5RAP2-218ENST00000491334 CCDC180Q9P1Z9 1646 aa44.13■■■■■ 4.66
CDK5RAP2-218ENST00000491334 DNAJC5BQ9UF47 199 aa42.84■■■■■ 4.45
CDK5RAP2-218ENST00000491334 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.39
CDK5RAP2-218ENST00000491334 NACADO15069 1562 aa42■■■■■ 4.31
CDK5RAP2-218ENST00000491334 DCAF8L2P0C7V8 631 aa41.85■■■■■ 4.29
CDK5RAP2-218ENST00000491334 PABPN1Q86U42 306 aaKnown RBP eCLIP41.82■■■■■ 4.29
CDK5RAP2-218ENST00000491334 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
CDK5RAP2-218ENST00000491334 MYO15BQ96JP2 1530 aa41.2■■■■■ 4.19
CDK5RAP2-218ENST00000491334 BICRAQ9NZM4 1560 aa41.16■■■■■ 4.18
CDK5RAP2-218ENST00000491334 SHROOM4Q9ULL8 1493 aa40.61■■■■■ 4.09
CDK5RAP2-218ENST00000491334 CECR2Q9BXF3 1484 aa40.57■■■■■ 4.08
CDK5RAP2-218ENST00000491334 CC2D2AQ9P2K1 1620 aa40.49■■■■■ 4.07
CDK5RAP2-218ENST00000491334 DCAF1Q9Y4B6 1507 aa40.4■■■■■ 4.06
CDK5RAP2-218ENST00000491334 ZCCHC6Q5VYS8 1495 aaKnown RBP40.37■■■■■ 4.05
CDK5RAP2-218ENST00000491334 EIF4G1Q04637 1599 aaKnown RBP40.24■■■■■ 4.03
CDK5RAP2-218ENST00000491334 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
CDK5RAP2-218ENST00000491334 DNAJC5Q9H3Z4 198 aa39.92■■■■□ 3.98
CDK5RAP2-218ENST00000491334 CUX2O14529 1486 aa39.03■■■■□ 3.84
CDK5RAP2-218ENST00000491334 ERCC6Q03468 1493 aa38.89■■■■□ 3.82
CDK5RAP2-218ENST00000491334 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
CDK5RAP2-218ENST00000491334 ATAD2BQ9ULI0 1458 aa38.58■■■■□ 3.77
CDK5RAP2-218ENST00000491334 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
CDK5RAP2-218ENST00000491334 HMGXB3Q12766 1538 aa38.38■■■■□ 3.74
CDK5RAP2-218ENST00000491334 NESP48681 1621 aa38.36■■■■□ 3.73
CDK5RAP2-218ENST00000491334 SMARCA4P51532 1647 aa38.27■■■■□ 3.72
CDK5RAP2-218ENST00000491334 BAZ1BQ9UIG0 1483 aaKnown RBP38.16■■■■□ 3.7
CDK5RAP2-218ENST00000491334 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
CDK5RAP2-218ENST00000491334 THOC2Q8NI27 1593 aaKnown RBP38.02■■■■□ 3.68
CDK5RAP2-218ENST00000491334 LAMC3Q9Y6N6 1575 aa38■■■■□ 3.67
CDK5RAP2-218ENST00000491334 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
CDK5RAP2-218ENST00000491334 PDS5BQ9NTI5 1447 aa37.91■■■■□ 3.66
CDK5RAP2-218ENST00000491334 TRIM41Q8WV44 630 aa37.87■■■■□ 3.65
CDK5RAP2-218ENST00000491334 KIF21AQ7Z4S6 1674 aa37.74■■■■□ 3.63
CDK5RAP2-218ENST00000491334 MROH2BQ7Z745 1585 aa37.69■■■■□ 3.62
CDK5RAP2-218ENST00000491334 CADPSQ9ULU8 1353 aa37.65■■■■□ 3.62
CDK5RAP2-218ENST00000491334 MRC2Q9UBG0 1479 aa37.54■■■■□ 3.6
CDK5RAP2-218ENST00000491334 WDR62O43379 1518 aa37.41■■■■□ 3.58
CDK5RAP2-218ENST00000491334 OSCARQ8IYS5 282 aa37.29■■■■□ 3.56
CDK5RAP2-218ENST00000491334 CEP164Q9UPV0 1460 aa37.26■■■■□ 3.55
CDK5RAP2-218ENST00000491334 WIZO95785 1651 aa37.16■■■■□ 3.54
CDK5RAP2-218ENST00000491334 FANCD2Q9BXW9 1451 aa37.16■■■■□ 3.54
CDK5RAP2-218ENST00000491334 CFTRP13569 1480 aa37.01■■■■□ 3.52
CDK5RAP2-218ENST00000491334 URB2Q14146 1524 aaKnown RBP36.85■■■■□ 3.49
CDK5RAP2-218ENST00000491334 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
CDK5RAP2-218ENST00000491334 TOP2AP11388 1531 aaKnown RBP36.67■■■■□ 3.46
CDK5RAP2-218ENST00000491334 RIMBP3CA6NJZ7 1639 aa36.64■■■■□ 3.46
CDK5RAP2-218ENST00000491334 RIMBP3BA6NNM3 1639 aa36.64■■■■□ 3.46
CDK5RAP2-218ENST00000491334 RIMBP3Q9UFD9 1639 aa36.64■■■■□ 3.46
CDK5RAP2-218ENST00000491334 IFT140Q96RY7 1462 aa36.56■■■■□ 3.44
CDK5RAP2-218ENST00000491334 ZNF608Q9ULD9 1512 aaPredicted RBP36.53■■■■□ 3.44
CDK5RAP2-218ENST00000491334 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
CDK5RAP2-218ENST00000491334 CYB5RLQ6IPT4 315 aa36.45■■■■□ 3.43
CDK5RAP2-218ENST00000491334 PRDM2Q13029 1718 aa36.39■■■■□ 3.42
CDK5RAP2-218ENST00000491334 TOPBP1Q92547 1522 aa36.35■■■■□ 3.41
CDK5RAP2-218ENST00000491334 CCDC88BA6NC98 1476 aa36.34■■■■□ 3.41
CDK5RAP2-218ENST00000491334 ABCC8Q09428 1581 aa36.32■■■■□ 3.4
CDK5RAP2-218ENST00000491334 TRHP20396 242 aaPredicted RBP36.29■■■■□ 3.4
CDK5RAP2-218ENST00000491334 EIF4G3O43432 1585 aaKnown RBP36.21■■■■□ 3.39
CDK5RAP2-218ENST00000491334 FBLN2P98095 1184 aa36.19■■■■□ 3.38
CDK5RAP2-218ENST00000491334 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.383e-9■■■■■ 53.3
CDK5RAP2-218ENST00000491334 DNMBPQ6XZF7 1577 aa36.13■■■■□ 3.37
CDK5RAP2-218ENST00000491334 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
CDK5RAP2-218ENST00000491334 CHD1O14646 1710 aa36.04■■■■□ 3.36
CDK5RAP2-218ENST00000491334 TARBP1Q13395 1621 aaKnown RBP36.03■■■■□ 3.36
CDK5RAP2-218ENST00000491334 POLA1P09884 1462 aaPredicted RBP35.93■■■■□ 3.34
CDK5RAP2-218ENST00000491334 SOGA1O94964 1423 aa35.87■■■■□ 3.33
CDK5RAP2-218ENST00000491334 TDRD9Q8NDG6 1382 aaKnown RBP35.87■■■■□ 3.33
CDK5RAP2-218ENST00000491334 RAD54L2Q9Y4B4 1467 aa35.84■■■■□ 3.33
CDK5RAP2-218ENST00000491334 CHMP7Q8WUX9 453 aaPredicted RBP35.82■■■■□ 3.32
CDK5RAP2-218ENST00000491334 AEBP2Q6ZN18 517 aaPredicted RBP35.78■■■■□ 3.32
CDK5RAP2-218ENST00000491334 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
CDK5RAP2-218ENST00000491334 CLASP1Q7Z460 1538 aa35.67■■■■□ 3.3
CDK5RAP2-218ENST00000491334 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
CDK5RAP2-218ENST00000491334 WDR97A6NE52 1622 aa35.64■■■■□ 3.3
CDK5RAP2-218ENST00000491334 MAGI1Q96QZ7 1491 aaPredicted RBP35.63■■■■□ 3.29
CDK5RAP2-218ENST00000491334 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
CDK5RAP2-218ENST00000491334 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
CDK5RAP2-218ENST00000491334 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
CDK5RAP2-218ENST00000491334 CUX1P39880 1505 aa35.44■■■■□ 3.26
CDK5RAP2-218ENST00000491334 GAPVD1Q14C86 1478 aa35.43■■■■□ 3.26
CDK5RAP2-218ENST00000491334 PBRM1Q86U86 1689 aa35.22■■■■□ 3.23
CDK5RAP2-218ENST00000491334 ABCA10Q8WWZ4 1543 aa35.19■■■■□ 3.22
CDK5RAP2-218ENST00000491334 ABCA5Q8WWZ7 1642 aa35.1■■■■□ 3.21
CDK5RAP2-218ENST00000491334 GRIN2AQ12879 1464 aa35.09■■■■□ 3.21
CDK5RAP2-218ENST00000491334 ERCC6L2Q5T890 1561 aa35.05■■■■□ 3.2
CDK5RAP2-218ENST00000491334 NUP160Q12769 1436 aa34.99■■■■□ 3.19
CDK5RAP2-218ENST00000491334 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
CDK5RAP2-218ENST00000491334 CEP170Q5SW79 1584 aa34.98■■■■□ 3.19
CDK5RAP2-218ENST00000491334 FHAD1B1AJZ9 1412 aa34.9■■■■□ 3.18
CDK5RAP2-218ENST00000491334 ADAMTS12P58397 1594 aa34.88■■■■□ 3.17
CDK5RAP2-218ENST00000491334 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
CDK5RAP2-218ENST00000491334 JPH4Q96JJ6 628 aa34.8■■■■□ 3.16
CDK5RAP2-218ENST00000491334 PRG4Q92954 1404 aaPredicted RBP34.78■■■■□ 3.16
CDK5RAP2-218ENST00000491334 NPM1P06748 294 aaKnown RBP eCLIP34.74■■■■□ 3.15
CDK5RAP2-218ENST00000491334 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
CDK5RAP2-218ENST00000491334 FAM69CQ0P6D2 419 aa34.73■■■■□ 3.15
CDK5RAP2-218ENST00000491334 KIF13AQ9H1H9 1805 aa34.71■■■■□ 3.15
CDK5RAP2-218ENST00000491334 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms