RNA–Protein interactions for RNA: ENST00000463882.1

PRKRA-207, Transcript of protein activator of interferon induced protein kinase EIF2AK2, humanhuman

TSL 2

Gene PRKRA, Length 541 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRA-207ENST00000463882 NISCHQ9Y2I1 1504 aa53.22■■■■■ 6.11
PRKRA-207ENST00000463882 ABCC9O60706 1549 aa48.34■■■■■ 5.33
PRKRA-207ENST00000463882 CCDC180Q9P1Z9 1646 aa47.86■■■■■ 5.25
PRKRA-207ENST00000463882 DNAJC5BQ9UF47 199 aa45.74■■■■■ 4.91
PRKRA-207ENST00000463882 RB1CC1Q8TDY2 1594 aa45.74■■■■■ 4.91
PRKRA-207ENST00000463882 NACADO15069 1562 aa45.33■■■■■ 4.85
PRKRA-207ENST00000463882 DCAF8L2P0C7V8 631 aa45.13■■■■■ 4.82
PRKRA-207ENST00000463882 PABPN1Q86U42 306 aaKnown RBP eCLIP44.97■■■■■ 4.79
PRKRA-207ENST00000463882 UNC13AQ9UPW8 1703 aa44.84■■■■■ 4.77
PRKRA-207ENST00000463882 MYO15BQ96JP2 1530 aa44.54■■■■■ 4.72
PRKRA-207ENST00000463882 BICRAQ9NZM4 1560 aa44.53■■■■■ 4.72
PRKRA-207ENST00000463882 ZCCHC6Q5VYS8 1495 aaKnown RBP44.03■■■■■ 4.64
PRKRA-207ENST00000463882 DCAF1Q9Y4B6 1507 aa43.86■■■■■ 4.61
PRKRA-207ENST00000463882 SCRIBQ14160 1630 aa43.7■■■■■ 4.59
PRKRA-207ENST00000463882 SHROOM4Q9ULL8 1493 aa43.69■■■■■ 4.58
PRKRA-207ENST00000463882 CC2D2AQ9P2K1 1620 aa43.62■■■■■ 4.57
PRKRA-207ENST00000463882 CECR2Q9BXF3 1484 aa43.52■■■■■ 4.56
PRKRA-207ENST00000463882 EIF4G1Q04637 1599 aaKnown RBP43.42■■■■■ 4.54
PRKRA-207ENST00000463882 DNAJC5Q9H3Z4 198 aa42.14■■■■■ 4.34
PRKRA-207ENST00000463882 NCAPD3P42695 1498 aa41.87■■■■■ 4.29
PRKRA-207ENST00000463882 ATAD2BQ9ULI0 1458 aa41.73■■■■■ 4.27
PRKRA-207ENST00000463882 CUX2O14529 1486 aa41.69■■■■■ 4.26
PRKRA-207ENST00000463882 ERCC6Q03468 1493 aa41.67■■■■■ 4.26
PRKRA-207ENST00000463882 SMARCA4P51532 1647 aa41.61■■■■■ 4.25
PRKRA-207ENST00000463882 SMARCA2P51531 1590 aa41.53■■■■■ 4.24
PRKRA-207ENST00000463882 HMGXB3Q12766 1538 aa41.52■■■■■ 4.24
PRKRA-207ENST00000463882 NESP48681 1621 aa41.46■■■■■ 4.23
PRKRA-207ENST00000463882 BAZ1AQ9NRL2 1556 aaPredicted RBP41.29■■■■■ 4.2
PRKRA-207ENST00000463882 BAZ1BQ9UIG0 1483 aaKnown RBP41.28■■■■■ 4.2
PRKRA-207ENST00000463882 PEG3Q9GZU2 1588 aa41.16■■■■■ 4.18
PRKRA-207ENST00000463882 MROH2BQ7Z745 1585 aa41.08■■■■■ 4.17
PRKRA-207ENST00000463882 THOC2Q8NI27 1593 aaKnown RBP41.06■■■■■ 4.16
PRKRA-207ENST00000463882 LAMC3Q9Y6N6 1575 aa40.98■■■■■ 4.15
PRKRA-207ENST00000463882 KIF21AQ7Z4S6 1674 aa40.88■■■■■ 4.13
PRKRA-207ENST00000463882 PDS5BQ9NTI5 1447 aa40.73■■■■■ 4.11
PRKRA-207ENST00000463882 CADPSQ9ULU8 1353 aa40.6■■■■■ 4.09
PRKRA-207ENST00000463882 WIZO95785 1651 aa40.58■■■■■ 4.09
PRKRA-207ENST00000463882 MRC2Q9UBG0 1479 aa40.45■■■■■ 4.07
PRKRA-207ENST00000463882 WDR62O43379 1518 aa40.37■■■■■ 4.05
PRKRA-207ENST00000463882 CEP164Q9UPV0 1460 aa40.21■■■■■ 4.03
PRKRA-207ENST00000463882 TRIM41Q8WV44 630 aa40.2■■■■■ 4.03
PRKRA-207ENST00000463882 FANCD2Q9BXW9 1451 aa40.16■■■■■ 4.02
PRKRA-207ENST00000463882 CFTRP13569 1480 aa40.06■■■■■ 4
PRKRA-207ENST00000463882 RSF1Q96T23 1441 aaPredicted RBP40.05■■■■■ 4
PRKRA-207ENST00000463882 TOP2AP11388 1531 aaKnown RBP39.96■■■■□ 3.99
PRKRA-207ENST00000463882 URB2Q14146 1524 aaKnown RBP39.9■■■■□ 3.98
PRKRA-207ENST00000463882 OSCARQ8IYS5 282 aa39.75■■■■□ 3.95
PRKRA-207ENST00000463882 PRDM2Q13029 1718 aa39.63■■■■□ 3.94
PRKRA-207ENST00000463882 CCDC88BA6NC98 1476 aa39.55■■■■□ 3.92
PRKRA-207ENST00000463882 ZNF608Q9ULD9 1512 aaPredicted RBP39.49■■■■□ 3.91
PRKRA-207ENST00000463882 IFT140Q96RY7 1462 aa39.4■■■■□ 3.9
PRKRA-207ENST00000463882 TOPBP1Q92547 1522 aa39.38■■■■□ 3.89
PRKRA-207ENST00000463882 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
PRKRA-207ENST00000463882 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
PRKRA-207ENST00000463882 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
PRKRA-207ENST00000463882 EIF4G3O43432 1585 aaKnown RBP39.21■■■■□ 3.87
PRKRA-207ENST00000463882 ARHGEF11O15085 1522 aa39.17■■■■□ 3.86
PRKRA-207ENST00000463882 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
PRKRA-207ENST00000463882 ABCC8Q09428 1581 aa39.14■■■■□ 3.86
PRKRA-207ENST00000463882 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.84
PRKRA-207ENST00000463882 AQRO60306 1485 aaKnown RBP eCLIP39.06■■■■□ 3.843e-6■■■■□ 24.7
PRKRA-207ENST00000463882 CHD1O14646 1710 aa39.02■■■■□ 3.84
PRKRA-207ENST00000463882 POLA1P09884 1462 aaPredicted RBP38.95■■■■□ 3.83
PRKRA-207ENST00000463882 CYB5RLQ6IPT4 315 aa38.91■■■■□ 3.82
PRKRA-207ENST00000463882 RAD54L2Q9Y4B4 1467 aa38.87■■■■□ 3.81
PRKRA-207ENST00000463882 FBLN2P98095 1184 aa38.85■■■■□ 3.81
PRKRA-207ENST00000463882 ARAP1Q96P48 1450 aa38.79■■■■□ 3.8
PRKRA-207ENST00000463882 TDRD9Q8NDG6 1382 aaKnown RBP38.77■■■■□ 3.8
PRKRA-207ENST00000463882 SOGA1O94964 1423 aa38.74■■■■□ 3.79
PRKRA-207ENST00000463882 FGD5Q6ZNL6 1462 aa38.66■■■■□ 3.78
PRKRA-207ENST00000463882 SNAPC4Q5SXM2 1469 aa38.64■■■■□ 3.78
PRKRA-207ENST00000463882 CUX1P39880 1505 aa38.6■■■■□ 3.77
PRKRA-207ENST00000463882 TRHP20396 242 aaPredicted RBP38.57■■■■□ 3.76
PRKRA-207ENST00000463882 CLASP1Q7Z460 1538 aa38.53■■■■□ 3.76
PRKRA-207ENST00000463882 WDR97A6NE52 1622 aa38.51■■■■□ 3.76
PRKRA-207ENST00000463882 CHMP7Q8WUX9 453 aaPredicted RBP38.46■■■■□ 3.75
PRKRA-207ENST00000463882 MAGI1Q96QZ7 1491 aaPredicted RBP38.44■■■■□ 3.74
PRKRA-207ENST00000463882 GRIN2BQ13224 1484 aa38.42■■■■□ 3.74
PRKRA-207ENST00000463882 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
PRKRA-207ENST00000463882 SYNJ2O15056 1496 aa38.34■■■■□ 3.73
PRKRA-207ENST00000463882 PBRM1Q86U86 1689 aa38.31■■■■□ 3.72
PRKRA-207ENST00000463882 GAPVD1Q14C86 1478 aa38.27■■■■□ 3.72
PRKRA-207ENST00000463882 ABCA5Q8WWZ7 1642 aa38.17■■■■□ 3.7
PRKRA-207ENST00000463882 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
PRKRA-207ENST00000463882 SUPT5HO00267 1087 aaKnown RBP38.05■■■■□ 3.68
PRKRA-207ENST00000463882 ERCC6L2Q5T890 1561 aa38■■■■□ 3.67
PRKRA-207ENST00000463882 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
PRKRA-207ENST00000463882 ADAMTS12P58397 1594 aa37.91■■■■□ 3.66
PRKRA-207ENST00000463882 WRNQ14191 1432 aaPredicted RBP eCLIP37.9■■■■□ 3.66
PRKRA-207ENST00000463882 CEP170Q5SW79 1584 aa37.89■■■■□ 3.66
PRKRA-207ENST00000463882 BIVM-ERCC5R4GMW8 1640 aa37.84■■■■□ 3.65
PRKRA-207ENST00000463882 NUP160Q12769 1436 aa37.84■■■■□ 3.65
PRKRA-207ENST00000463882 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
PRKRA-207ENST00000463882 FHAD1B1AJZ9 1412 aa37.74■■■■□ 3.63
PRKRA-207ENST00000463882 SHROOM2Q13796 1616 aa37.72■■■■□ 3.63
PRKRA-207ENST00000463882 AEBP2Q6ZN18 517 aaPredicted RBP37.66■■■■□ 3.62
PRKRA-207ENST00000463882 ERICH3Q5RHP9 1530 aa37.65■■■■□ 3.62
PRKRA-207ENST00000463882 PRG4Q92954 1404 aaPredicted RBP37.52■■■■□ 3.6
PRKRA-207ENST00000463882 KIF13AQ9H1H9 1805 aa37.46■■■■□ 3.59
PRKRA-207ENST00000463882 JPH4Q96JJ6 628 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms