Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB5BP61020 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB5BP61020 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAB5BP61020 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB5BP61020 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB5BP61020 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB5BP61020 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB5BP61020 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.72□□□□□ -0.05
RAB5BP61020 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB5BP61020 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 MIR2861-201ENST00000636310 90 ntBASIC14.72□□□□□ -0.05
RAB5BP61020 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB5BP61020 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB5BP61020 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB5BP61020 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB5BP61020 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.71□□□□□ -0.05
RAB5BP61020 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RAB5BP61020 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
RAB5BP61020 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB5BP61020 Z92544.1-202ENST00000571933 1220 ntBASIC14.71□□□□□ -0.05
RAB5BP61020 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB5BP61020 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RAB5BP61020 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB5BP61020 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB5BP61020 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB5BP61020 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB5BP61020 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB5BP61020 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RAB5BP61020 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB5BP61020 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB5BP61020 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB5BP61020 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB5BP61020 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB5BP61020 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB5BP61020 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAB5BP61020 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB5BP61020 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB5BP61020 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms