Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC073592.3-201ENST00000625118 1834 ntBASIC16.88■□□□□ 0.29
HLA-DPB1P04440 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPB1P04440 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 ESRRAP1-201ENST00000400596 1257 ntBASIC16.86■□□□□ 0.29
HLA-DPB1P04440 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 AC026366.1-201ENST00000488803 879 ntBASIC16.86■□□□□ 0.29
HLA-DPB1P04440 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPB1P04440 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DPB1P04440 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms