Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD9Q9P000 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD9Q9P000 RARRES2P7-201ENST00000567349 469 ntBASIC21.16■□□□□ 0.98
COMMD9Q9P000 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD9Q9P000 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COMMD9Q9P000 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD9Q9P000 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD9Q9P000 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.15■□□□□ 0.98
COMMD9Q9P000 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD9Q9P000 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COMMD9Q9P000 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD9Q9P000 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD9Q9P000 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD9Q9P000 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD9Q9P000 AC020928.2-201ENST00000588717 2197 ntBASIC21.13■□□□□ 0.97
COMMD9Q9P000 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD9Q9P000 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD9Q9P000 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COMMD9Q9P000 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COMMD9Q9P000 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD9Q9P000 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD9Q9P000 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD9Q9P000 SETD8P1-201ENST00000623146 1180 ntBASIC21.12■□□□□ 0.97
COMMD9Q9P000 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD9Q9P000 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD9Q9P000 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD9Q9P000 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
COMMD9Q9P000 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
COMMD9Q9P000 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD9Q9P000 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD9Q9P000 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD9Q9P000 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.1■□□□□ 0.97
COMMD9Q9P000 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COMMD9Q9P000 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.1■□□□□ 0.97
COMMD9Q9P000 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.09■□□□□ 0.97
COMMD9Q9P000 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD9Q9P000 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD9Q9P000 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD9Q9P000 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD9Q9P000 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD9Q9P000 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD9Q9P000 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD9Q9P000 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COMMD9Q9P000 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD9Q9P000 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COMMD9Q9P000 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD9Q9P000 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD9Q9P000 AC145676.1-201ENST00000514988 2004 ntBASIC21.06■□□□□ 0.96
COMMD9Q9P000 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.06■□□□□ 0.96
COMMD9Q9P000 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD9Q9P000 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
COMMD9Q9P000 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD9Q9P000 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COMMD9Q9P000 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD9Q9P000 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD9Q9P000 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COMMD9Q9P000 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.05■□□□□ 0.96
COMMD9Q9P000 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD9Q9P000 AC093323.1-202ENST00000635031 2045 ntBASIC21.05■□□□□ 0.96
COMMD9Q9P000 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
COMMD9Q9P000 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD9Q9P000 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD9Q9P000 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COMMD9Q9P000 AP004833.2-201ENST00000532228 1454 ntBASIC21.03■□□□□ 0.96
COMMD9Q9P000 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.03■□□□□ 0.96
COMMD9Q9P000 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD9Q9P000 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD9Q9P000 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.02■□□□□ 0.96
COMMD9Q9P000 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD9Q9P000 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD9Q9P000 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD9Q9P000 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD9Q9P000 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD9Q9P000 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.01■□□□□ 0.95
COMMD9Q9P000 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD9Q9P000 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD9Q9P000 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COMMD9Q9P000 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COMMD9Q9P000 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COMMD9Q9P000 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
COMMD9Q9P000 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD9Q9P000 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
COMMD9Q9P000 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms