Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM11BQ8TCY0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM11BQ8TCY0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.29■□□□□ 0.2
SMIM11BQ8TCY0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11BQ8TCY0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11BQ8TCY0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11BQ8TCY0 AC006077.2-201ENST00000623591 457 ntBASIC16.27■□□□□ 0.2
SMIM11BQ8TCY0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11BQ8TCY0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11BQ8TCY0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM11BQ8TCY0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 DYNLL1-208ENST00000550178 581 ntBASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11BQ8TCY0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.25■□□□□ 0.19
SMIM11BQ8TCY0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM11BQ8TCY0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM11BQ8TCY0 DUSP8P4-201ENST00000399538 1761 ntBASIC16.23■□□□□ 0.19
SMIM11BQ8TCY0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11BQ8TCY0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM11BQ8TCY0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11BQ8TCY0 AC100797.4-201ENST00000631653 1827 ntBASIC16.22■□□□□ 0.19
SMIM11BQ8TCY0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11BQ8TCY0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11BQ8TCY0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11BQ8TCY0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11BQ8TCY0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11BQ8TCY0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM11BQ8TCY0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM11BQ8TCY0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11BQ8TCY0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM11BQ8TCY0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11BQ8TCY0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 AC092803.2-201ENST00000564287 1899 ntBASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 AP002414.2-202ENST00000590929 1450 ntBASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11BQ8TCY0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SMIM11BQ8TCY0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11BQ8TCY0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11BQ8TCY0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 AC127502.1-201ENST00000399971 1502 ntBASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM11BQ8TCY0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM11BQ8TCY0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM11BQ8TCY0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM11BQ8TCY0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.16■□□□□ 0.18
SMIM11BQ8TCY0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms