Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM2Q8N967 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.59■□□□□ 0.89
LRTM2Q8N967 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM2Q8N967 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM2Q8N967 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.59■□□□□ 0.89
LRTM2Q8N967 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LRTM2Q8N967 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LRTM2Q8N967 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRTM2Q8N967 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.58■□□□□ 0.88
LRTM2Q8N967 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRTM2Q8N967 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.57■□□□□ 0.88
LRTM2Q8N967 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM2Q8N967 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
LRTM2Q8N967 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM2Q8N967 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRTM2Q8N967 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRTM2Q8N967 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM2Q8N967 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LRTM2Q8N967 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM2Q8N967 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM2Q8N967 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM2Q8N967 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM2Q8N967 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM2Q8N967 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.55■□□□□ 0.88
LRTM2Q8N967 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM2Q8N967 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.55■□□□□ 0.88
LRTM2Q8N967 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM2Q8N967 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM2Q8N967 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM2Q8N967 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM2Q8N967 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
LRTM2Q8N967 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM2Q8N967 AC092803.2-201ENST00000564287 1899 ntBASIC20.54■□□□□ 0.88
LRTM2Q8N967 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.53■□□□□ 0.88
LRTM2Q8N967 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRTM2Q8N967 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRTM2Q8N967 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRTM2Q8N967 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.52■□□□□ 0.88
LRTM2Q8N967 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM2Q8N967 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM2Q8N967 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRTM2Q8N967 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRTM2Q8N967 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM2Q8N967 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM2Q8N967 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.51■□□□□ 0.87
LRTM2Q8N967 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM2Q8N967 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM2Q8N967 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM2Q8N967 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM2Q8N967 AC093323.1-202ENST00000635031 2045 ntBASIC20.49■□□□□ 0.87
LRTM2Q8N967 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM2Q8N967 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM2Q8N967 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.49■□□□□ 0.87
LRTM2Q8N967 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
LRTM2Q8N967 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.49■□□□□ 0.87
LRTM2Q8N967 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM2Q8N967 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRTM2Q8N967 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.48■□□□□ 0.87
LRTM2Q8N967 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRTM2Q8N967 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LRTM2Q8N967 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM2Q8N967 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.47■□□□□ 0.87
LRTM2Q8N967 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRTM2Q8N967 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM2Q8N967 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM2Q8N967 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM2Q8N967 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM2Q8N967 AC135983.2-203ENST00000454486 1613 ntBASIC20.45■□□□□ 0.87
LRTM2Q8N967 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM2Q8N967 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM2Q8N967 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM2Q8N967 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM2Q8N967 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.44■□□□□ 0.86
LRTM2Q8N967 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.44■□□□□ 0.86
LRTM2Q8N967 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM2Q8N967 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.44■□□□□ 0.86
LRTM2Q8N967 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM2Q8N967 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM2Q8N967 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRTM2Q8N967 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM2Q8N967 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM2Q8N967 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM2Q8N967 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LRTM2Q8N967 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM2Q8N967 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LRTM2Q8N967 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM2Q8N967 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM2Q8N967 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.42■□□□□ 0.86
LRTM2Q8N967 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.42■□□□□ 0.86
LRTM2Q8N967 SETD8P1-201ENST00000623146 1180 ntBASIC20.41■□□□□ 0.86
LRTM2Q8N967 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM2Q8N967 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM2Q8N967 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.41■□□□□ 0.86
LRTM2Q8N967 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM2Q8N967 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
LRTM2Q8N967 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM2Q8N967 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM2Q8N967 AL391121.1-201ENST00000607967 1349 ntBASIC20.4■□□□□ 0.86
LRTM2Q8N967 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.39■□□□□ 0.86
LRTM2Q8N967 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms