Protein–RNA interactions for Protein: Q8IXM3

MRPL41, 39S ribosomal protein L41, mitochondrial, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL41Q8IXM3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL41Q8IXM3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL41Q8IXM3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL41Q8IXM3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
MRPL41Q8IXM3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.38■□□□□ 0.85
MRPL41Q8IXM3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPL41Q8IXM3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL41Q8IXM3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.37■□□□□ 0.85
MRPL41Q8IXM3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPL41Q8IXM3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MRPL41Q8IXM3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL41Q8IXM3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL41Q8IXM3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.36■□□□□ 0.85
MRPL41Q8IXM3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL41Q8IXM3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.35■□□□□ 0.85
MRPL41Q8IXM3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 BX255925.1-201ENST00000566954 1854 ntBASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
MRPL41Q8IXM3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MRPL41Q8IXM3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL41Q8IXM3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL41Q8IXM3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.33■□□□□ 0.85
MRPL41Q8IXM3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL41Q8IXM3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL41Q8IXM3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL41Q8IXM3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL41Q8IXM3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL41Q8IXM3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.3■□□□□ 0.84
MRPL41Q8IXM3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MRPL41Q8IXM3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL41Q8IXM3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL41Q8IXM3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL41Q8IXM3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MRPL41Q8IXM3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.28■□□□□ 0.84
MRPL41Q8IXM3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.28■□□□□ 0.84
MRPL41Q8IXM3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL41Q8IXM3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL41Q8IXM3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.27■□□□□ 0.84
MRPL41Q8IXM3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
MRPL41Q8IXM3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.27■□□□□ 0.83
MRPL41Q8IXM3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL41Q8IXM3 LINC01971-201ENST00000617888 1048 ntBASIC20.25■□□□□ 0.83
MRPL41Q8IXM3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MRPL41Q8IXM3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL41Q8IXM3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL41Q8IXM3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 MIR639-201ENST00000384974 98 ntBASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 DUX4L11-201ENST00000611504 1267 ntBASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 DUX4L12-201ENST00000614593 1267 ntBASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 DUX4L14-201ENST00000621227 1267 ntBASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 AP002414.2-202ENST00000590929 1450 ntBASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL41Q8IXM3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.22■□□□□ 0.83
MRPL41Q8IXM3 MIR3648-2-201ENST00000581792 180 ntBASIC20.22■□□□□ 0.83
MRPL41Q8IXM3 MIR3648-1-201ENST00000615959 180 ntBASIC20.22■□□□□ 0.83
MRPL41Q8IXM3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL41Q8IXM3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL41Q8IXM3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.21■□□□□ 0.83
MRPL41Q8IXM3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL41Q8IXM3 LINC01003-201ENST00000564834 1764 ntBASIC20.21■□□□□ 0.83
MRPL41Q8IXM3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.21■□□□□ 0.83
MRPL41Q8IXM3 AC100797.4-201ENST00000631653 1827 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms