Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 AC087741.3-201ENST00000624270 1347 ntBASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 AL162393.1-201ENST00000437852 946 ntBASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 AC018358.1-201ENST00000631079 1402 ntBASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
MRPL55Q7Z7F7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MRPL55Q7Z7F7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms