Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMC4Q7Z404 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
TMC4Q7Z404 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TMC4Q7Z404 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.24■■■□□ 2.59
TMC4Q7Z404 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.23■■■□□ 2.59
TMC4Q7Z404 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TMC4Q7Z404 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TMC4Q7Z404 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TMC4Q7Z404 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.23■■■□□ 2.59
TMC4Q7Z404 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TMC4Q7Z404 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.22■■■□□ 2.59
TMC4Q7Z404 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.22■■■□□ 2.59
TMC4Q7Z404 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
TMC4Q7Z404 AC007029.1-201ENST00000604183 313 ntBASIC31.21■■■□□ 2.59
TMC4Q7Z404 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TMC4Q7Z404 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TMC4Q7Z404 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.2■■■□□ 2.59
TMC4Q7Z404 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.2■■■□□ 2.59
TMC4Q7Z404 ST7-AS1-201ENST00000456775 1889 ntBASIC31.19■■■□□ 2.58
TMC4Q7Z404 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.19■■■□□ 2.58
TMC4Q7Z404 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TMC4Q7Z404 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.19■■■□□ 2.58
TMC4Q7Z404 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
TMC4Q7Z404 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.18■■■□□ 2.58
TMC4Q7Z404 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.18■■■□□ 2.58
TMC4Q7Z404 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC4Q7Z404 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC4Q7Z404 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC4Q7Z404 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC4Q7Z404 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.17■■■□□ 2.58
TMC4Q7Z404 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TMC4Q7Z404 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMC4Q7Z404 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TMC4Q7Z404 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.15■■■□□ 2.58
TMC4Q7Z404 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.15■■■□□ 2.58
TMC4Q7Z404 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TMC4Q7Z404 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TMC4Q7Z404 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.12■■■□□ 2.57
TMC4Q7Z404 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TMC4Q7Z404 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
TMC4Q7Z404 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC4Q7Z404 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TMC4Q7Z404 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
TMC4Q7Z404 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMC4Q7Z404 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMC4Q7Z404 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TMC4Q7Z404 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.09■■■□□ 2.57
TMC4Q7Z404 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.09■■■□□ 2.57
TMC4Q7Z404 AC100797.4-201ENST00000631653 1827 ntBASIC31.08■■■□□ 2.57
TMC4Q7Z404 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TMC4Q7Z404 AC129492.7-201ENST00000622992 756 ntBASIC31.08■■■□□ 2.57
TMC4Q7Z404 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TMC4Q7Z404 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TMC4Q7Z404 SMPD5-203ENST00000639008 1464 ntBASIC31.08■■■□□ 2.57
TMC4Q7Z404 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
TMC4Q7Z404 AC009831.1-201ENST00000580420 1582 ntBASIC31.06■■■□□ 2.56
TMC4Q7Z404 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TMC4Q7Z404 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TMC4Q7Z404 AC133552.2-201ENST00000619106 1032 ntBASIC31.06■■■□□ 2.56
TMC4Q7Z404 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.05■■■□□ 2.56
TMC4Q7Z404 AL359258.2-201ENST00000564063 1566 ntBASIC31.05■■■□□ 2.56
TMC4Q7Z404 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
TMC4Q7Z404 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TMC4Q7Z404 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TMC4Q7Z404 AL592293.1-201ENST00000502889 1188 ntBASIC31.04■■■□□ 2.56
TMC4Q7Z404 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.04■■■□□ 2.56
TMC4Q7Z404 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
TMC4Q7Z404 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TMC4Q7Z404 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
TMC4Q7Z404 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TMC4Q7Z404 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.02■■■□□ 2.56
TMC4Q7Z404 RARRES2P1-201ENST00000474487 481 ntBASIC31.02■■■□□ 2.56
TMC4Q7Z404 AC025884.2-201ENST00000553429 711 ntBASIC31.02■■■□□ 2.56
TMC4Q7Z404 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TMC4Q7Z404 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TMC4Q7Z404 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.01■■■□□ 2.56
TMC4Q7Z404 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TMC4Q7Z404 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
TMC4Q7Z404 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TMC4Q7Z404 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31■■■□□ 2.55
TMC4Q7Z404 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31■■■□□ 2.55
TMC4Q7Z404 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TMC4Q7Z404 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.99■■■□□ 2.55
TMC4Q7Z404 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TMC4Q7Z404 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TMC4Q7Z404 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.99■■■□□ 2.55
TMC4Q7Z404 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
TMC4Q7Z404 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
TMC4Q7Z404 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TMC4Q7Z404 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
TMC4Q7Z404 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.98■■■□□ 2.55
TMC4Q7Z404 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
TMC4Q7Z404 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.98■■■□□ 2.55
TMC4Q7Z404 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
TMC4Q7Z404 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.97■■■□□ 2.55
TMC4Q7Z404 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.97■■■□□ 2.55
TMC4Q7Z404 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.97■■■□□ 2.55
TMC4Q7Z404 AC026202.3-201ENST00000600805 1127 ntBASIC30.97■■■□□ 2.55
TMC4Q7Z404 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TMC4Q7Z404 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms