Protein–RNA interactions for Protein: Q5VVJ2

MYSM1, Histone H2A deubiquitinase MYSM1, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYSM1Q5VVJ2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
MYSM1Q5VVJ2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
MYSM1Q5VVJ2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
MYSM1Q5VVJ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
MYSM1Q5VVJ2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
MYSM1Q5VVJ2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.28■■■□□ 2.28
MYSM1Q5VVJ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
MYSM1Q5VVJ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.27■■■□□ 2.28
MYSM1Q5VVJ2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MYSM1Q5VVJ2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
MYSM1Q5VVJ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MYSM1Q5VVJ2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.26■■■□□ 2.27
MYSM1Q5VVJ2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
MYSM1Q5VVJ2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
MYSM1Q5VVJ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
MYSM1Q5VVJ2 AP002414.2-202ENST00000590929 1450 ntBASIC29.24■■■□□ 2.27
MYSM1Q5VVJ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
MYSM1Q5VVJ2 LINC01003-201ENST00000564834 1764 ntBASIC29.24■■■□□ 2.27
MYSM1Q5VVJ2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
MYSM1Q5VVJ2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.22■■■□□ 2.27
MYSM1Q5VVJ2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 AL121749.1-202ENST00000609313 2153 ntBASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
MYSM1Q5VVJ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
MYSM1Q5VVJ2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
MYSM1Q5VVJ2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
MYSM1Q5VVJ2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.2■■■□□ 2.26
MYSM1Q5VVJ2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
MYSM1Q5VVJ2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
MYSM1Q5VVJ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
MYSM1Q5VVJ2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
MYSM1Q5VVJ2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
MYSM1Q5VVJ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.17■■■□□ 2.26
MYSM1Q5VVJ2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 HSD17B1P1-201ENST00000590052 955 ntBASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.16■■■□□ 2.26
MYSM1Q5VVJ2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
MYSM1Q5VVJ2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
MYSM1Q5VVJ2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.14■■■□□ 2.25
MYSM1Q5VVJ2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
MYSM1Q5VVJ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
MYSM1Q5VVJ2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
MYSM1Q5VVJ2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
MYSM1Q5VVJ2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
MYSM1Q5VVJ2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
MYSM1Q5VVJ2 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.11■■■□□ 2.25
MYSM1Q5VVJ2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.11■■■□□ 2.25
MYSM1Q5VVJ2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.1■■■□□ 2.25
MYSM1Q5VVJ2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
MYSM1Q5VVJ2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.1■■■□□ 2.25
MYSM1Q5VVJ2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MYSM1Q5VVJ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MYSM1Q5VVJ2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.09■■■□□ 2.25
MYSM1Q5VVJ2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MYSM1Q5VVJ2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
MYSM1Q5VVJ2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
MYSM1Q5VVJ2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
MYSM1Q5VVJ2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
MYSM1Q5VVJ2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
MYSM1Q5VVJ2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
MYSM1Q5VVJ2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
MYSM1Q5VVJ2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.06■■■□□ 2.24
MYSM1Q5VVJ2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
MYSM1Q5VVJ2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
MYSM1Q5VVJ2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
MYSM1Q5VVJ2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
MYSM1Q5VVJ2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
MYSM1Q5VVJ2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
MYSM1Q5VVJ2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
MYSM1Q5VVJ2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
MYSM1Q5VVJ2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
MYSM1Q5VVJ2 AC018358.1-201ENST00000631079 1402 ntBASIC29.03■■■□□ 2.24
MYSM1Q5VVJ2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.03■■■□□ 2.24
MYSM1Q5VVJ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms