Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRPXP78539 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPXP78539 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPXP78539 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPXP78539 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPXP78539 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.63■□□□□ 0.89
SRPXP78539 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRPXP78539 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SRPXP78539 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.63■□□□□ 0.89
SRPXP78539 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPXP78539 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRPXP78539 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRPXP78539 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRPXP78539 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SRPXP78539 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.61■□□□□ 0.89
SRPXP78539 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRPXP78539 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.61■□□□□ 0.89
SRPXP78539 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRPXP78539 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRPXP78539 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SRPXP78539 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SRPXP78539 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.6■□□□□ 0.89
SRPXP78539 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRPXP78539 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SRPXP78539 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.59■□□□□ 0.89
SRPXP78539 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRPXP78539 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.59■□□□□ 0.89
SRPXP78539 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.59■□□□□ 0.89
SRPXP78539 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRPXP78539 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SRPXP78539 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
SRPXP78539 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRPXP78539 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRPXP78539 AC020928.2-201ENST00000588717 2197 ntBASIC20.58■□□□□ 0.88
SRPXP78539 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SRPXP78539 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SRPXP78539 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SRPXP78539 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.57■□□□□ 0.88
SRPXP78539 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRPXP78539 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.57■□□□□ 0.88
SRPXP78539 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRPXP78539 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRPXP78539 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.56■□□□□ 0.88
SRPXP78539 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
SRPXP78539 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SRPXP78539 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SRPXP78539 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SRPXP78539 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPXP78539 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPXP78539 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.55■□□□□ 0.88
SRPXP78539 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.55■□□□□ 0.88
SRPXP78539 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPXP78539 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
SRPXP78539 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.55■□□□□ 0.88
SRPXP78539 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SRPXP78539 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.55■□□□□ 0.88
SRPXP78539 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPXP78539 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPXP78539 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPXP78539 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPXP78539 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SRPXP78539 DUSP8P4-201ENST00000399538 1761 ntBASIC20.54■□□□□ 0.88
SRPXP78539 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPXP78539 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPXP78539 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.53■□□□□ 0.88
SRPXP78539 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPXP78539 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRPXP78539 SETD8P1-201ENST00000623146 1180 ntBASIC20.53■□□□□ 0.88
SRPXP78539 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.53■□□□□ 0.88
SRPXP78539 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPXP78539 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SRPXP78539 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRPXP78539 RARRES2P7-201ENST00000567349 469 ntBASIC20.52■□□□□ 0.88
SRPXP78539 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRPXP78539 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRPXP78539 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
SRPXP78539 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
SRPXP78539 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SRPXP78539 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRPXP78539 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRPXP78539 AC092803.2-201ENST00000564287 1899 ntBASIC20.5■□□□□ 0.87
SRPXP78539 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRPXP78539 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRPXP78539 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRPXP78539 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRPXP78539 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRPXP78539 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRPXP78539 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRPXP78539 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRPXP78539 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRPXP78539 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SRPXP78539 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRPXP78539 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRPXP78539 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRPXP78539 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRPXP78539 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRPXP78539 AL391121.1-201ENST00000607967 1349 ntBASIC20.46■□□□□ 0.87
SRPXP78539 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRPXP78539 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.45■□□□□ 0.86
SRPXP78539 AC135983.2-203ENST00000454486 1613 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms