Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
NEBP20929 PRTG-204ENST00000561292 833 ntTSL 3 BASIC10.06□□□□□ -0.8
NEBP20929 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NEBP20929 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC10.06□□□□□ -0.8
NEBP20929 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC10.06□□□□□ -0.8
NEBP20929 AC133552.2-201ENST00000619106 1032 ntBASIC10.06□□□□□ -0.8
NEBP20929 AC007029.1-201ENST00000604183 313 ntBASIC10.05□□□□□ -0.8
NEBP20929 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
NEBP20929 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC10.05□□□□□ -0.8
NEBP20929 LGR4-203ENST00000480977 492 ntTSL 2 BASIC10.05□□□□□ -0.8
NEBP20929 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
NEBP20929 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
NEBP20929 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC10.05□□□□□ -0.8
NEBP20929 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NEBP20929 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.05□□□□□ -0.8
NEBP20929 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC10.05□□□□□ -0.8
NEBP20929 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NEBP20929 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC10.05□□□□□ -0.8
NEBP20929 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC10.05□□□□□ -0.8
NEBP20929 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.04□□□□□ -0.8
NEBP20929 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC10.04□□□□□ -0.8
NEBP20929 Z92544.1-202ENST00000571933 1220 ntBASIC10.04□□□□□ -0.8
NEBP20929 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NEBP20929 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC10.04□□□□□ -0.8
NEBP20929 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NEBP20929 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC10.04□□□□□ -0.8
NEBP20929 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NEBP20929 DUX4L9-201ENST00000449051 1259 ntBASIC10.04□□□□□ -0.8
NEBP20929 AC131281.2-201ENST00000520478 145 ntBASIC10.04□□□□□ -0.8
NEBP20929 MIR6821-201ENST00000617625 74 ntBASIC10.04□□□□□ -0.8
NEBP20929 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC10.04□□□□□ -0.8
NEBP20929 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.03□□□□□ -0.8
NEBP20929 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
NEBP20929 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC10.03□□□□□ -0.8
NEBP20929 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
NEBP20929 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 AC074183.2-201ENST00000623112 922 ntBASIC10.03□□□□□ -0.8
NEBP20929 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC10.03□□□□□ -0.8
NEBP20929 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NEBP20929 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
NEBP20929 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.02□□□□□ -0.8
NEBP20929 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.02□□□□□ -0.81
NEBP20929 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
NEBP20929 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
NEBP20929 SMPD5-203ENST00000639008 1464 ntBASIC10.02□□□□□ -0.81
NEBP20929 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
NEBP20929 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC10.02□□□□□ -0.81
NEBP20929 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
NEBP20929 ECEL1P2-201ENST00000461596 1295 ntBASIC10.01□□□□□ -0.81
NEBP20929 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.01□□□□□ -0.81
NEBP20929 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC10.01□□□□□ -0.81
NEBP20929 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
NEBP20929 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.01□□□□□ -0.81
NEBP20929 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
NEBP20929 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
NEBP20929 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NEBP20929 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC10□□□□□ -0.81
NEBP20929 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC10□□□□□ -0.81
NEBP20929 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10□□□□□ -0.81
NEBP20929 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
NEBP20929 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
NEBP20929 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NEBP20929 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10□□□□□ -0.81
NEBP20929 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC10□□□□□ -0.81
NEBP20929 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10□□□□□ -0.81
NEBP20929 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
NEBP20929 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC10□□□□□ -0.81
NEBP20929 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10□□□□□ -0.81
NEBP20929 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC10□□□□□ -0.81
NEBP20929 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NEBP20929 EI24-212ENST00000615917 1407 ntTSL 2 BASIC9.99□□□□□ -0.81
NEBP20929 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC9.99□□□□□ -0.81
NEBP20929 MIR6765-201ENST00000614092 87 ntBASIC9.99□□□□□ -0.81
NEBP20929 PVT1_1.1-201ENST00000615125 194 ntBASIC9.99□□□□□ -0.81
NEBP20929 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NEBP20929 ABHD17AP1-201ENST00000358206 933 ntBASIC9.99□□□□□ -0.81
NEBP20929 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
NEBP20929 AC009831.1-201ENST00000580420 1582 ntBASIC9.99□□□□□ -0.81
NEBP20929 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC9.99□□□□□ -0.81
NEBP20929 UNC93B8-201ENST00000511903 705 ntBASIC9.98□□□□□ -0.81
NEBP20929 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
NEBP20929 AC087623.3-201ENST00000607047 1098 ntBASIC9.98□□□□□ -0.81
NEBP20929 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
NEBP20929 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
NEBP20929 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
NEBP20929 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC9.98□□□□□ -0.81
NEBP20929 SUDS3P1-201ENST00000505831 966 ntBASIC9.97□□□□□ -0.81
NEBP20929 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC9.97□□□□□ -0.81
NEBP20929 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NEBP20929 AC097381.1-201ENST00000429019 1296 ntBASIC9.97□□□□□ -0.81
NEBP20929 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms