Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
OPHN1O60890 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.11■■□□□ 1.77
OPHN1O60890 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.11■■□□□ 1.77
OPHN1O60890 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
OPHN1O60890 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
OPHN1O60890 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.11■■□□□ 1.77
OPHN1O60890 LINC00273-201ENST00000539813 1452 ntBASIC26.11■■□□□ 1.77
OPHN1O60890 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.1■■□□□ 1.77
OPHN1O60890 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
OPHN1O60890 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
OPHN1O60890 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
OPHN1O60890 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
OPHN1O60890 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.09■■□□□ 1.77
OPHN1O60890 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
OPHN1O60890 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
OPHN1O60890 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.07■■□□□ 1.76
OPHN1O60890 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
OPHN1O60890 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
OPHN1O60890 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.07■■□□□ 1.76
OPHN1O60890 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
OPHN1O60890 WHAMMP2-203ENST00000563942 1603 ntBASIC26.06■■□□□ 1.76
OPHN1O60890 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.05■■□□□ 1.76
OPHN1O60890 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.05■■□□□ 1.76
OPHN1O60890 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
OPHN1O60890 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
OPHN1O60890 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
OPHN1O60890 BX255925.1-201ENST00000566954 1854 ntBASIC26.04■■□□□ 1.76
OPHN1O60890 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
OPHN1O60890 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
OPHN1O60890 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.03■■□□□ 1.76
OPHN1O60890 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
OPHN1O60890 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
OPHN1O60890 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.03■■□□□ 1.76
OPHN1O60890 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
OPHN1O60890 AP002414.2-202ENST00000590929 1450 ntBASIC26.03■■□□□ 1.76
OPHN1O60890 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
OPHN1O60890 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
OPHN1O60890 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
OPHN1O60890 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
OPHN1O60890 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
OPHN1O60890 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
OPHN1O60890 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
OPHN1O60890 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
OPHN1O60890 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26■■□□□ 1.75
OPHN1O60890 CHML-204ENST00000638121 920 ntTSL 2 BASIC26■■□□□ 1.75
OPHN1O60890 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.99■■□□□ 1.75
OPHN1O60890 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
OPHN1O60890 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
OPHN1O60890 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
OPHN1O60890 LINC01003-201ENST00000564834 1764 ntBASIC25.97■■□□□ 1.75
OPHN1O60890 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
OPHN1O60890 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
OPHN1O60890 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
OPHN1O60890 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
OPHN1O60890 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 RARRES2P2-201ENST00000394842 485 ntBASIC25.96■■□□□ 1.75
OPHN1O60890 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.96■■□□□ 1.75
OPHN1O60890 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
OPHN1O60890 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.96■■□□□ 1.75
OPHN1O60890 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.95■■□□□ 1.75
OPHN1O60890 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.95■■□□□ 1.74
OPHN1O60890 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.95■■□□□ 1.74
OPHN1O60890 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.94■■□□□ 1.74
OPHN1O60890 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.94■■□□□ 1.74
OPHN1O60890 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.94■■□□□ 1.74
OPHN1O60890 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.94■■□□□ 1.74
OPHN1O60890 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
OPHN1O60890 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
OPHN1O60890 ABHD17AP5-201ENST00000580133 923 ntBASIC25.93■■□□□ 1.74
OPHN1O60890 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
OPHN1O60890 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
OPHN1O60890 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.91■■□□□ 1.74
OPHN1O60890 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.91■■□□□ 1.74
OPHN1O60890 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.9■■□□□ 1.74
OPHN1O60890 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
OPHN1O60890 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
OPHN1O60890 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
OPHN1O60890 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
OPHN1O60890 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
OPHN1O60890 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
OPHN1O60890 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
OPHN1O60890 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
OPHN1O60890 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
OPHN1O60890 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
OPHN1O60890 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
OPHN1O60890 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms