Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHOXO15266 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHOXO15266 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHOXO15266 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHOXO15266 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHOXO15266 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.22■□□□□ 0.99
SHOXO15266 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.21■□□□□ 0.99
SHOXO15266 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHOXO15266 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SHOXO15266 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHOXO15266 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHOXO15266 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.21■□□□□ 0.99
SHOXO15266 AC136428.2-201ENST00000563187 214 ntBASIC21.21■□□□□ 0.99
SHOXO15266 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHOXO15266 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHOXO15266 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHOXO15266 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHOXO15266 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.2■□□□□ 0.98
SHOXO15266 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHOXO15266 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHOXO15266 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SHOXO15266 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHOXO15266 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHOXO15266 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHOXO15266 AC010864.1-201ENST00000609407 1511 ntBASIC21.19■□□□□ 0.98
SHOXO15266 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.19■□□□□ 0.98
SHOXO15266 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SHOXO15266 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHOXO15266 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHOXO15266 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.17■□□□□ 0.98
SHOXO15266 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SHOXO15266 CAHM-201ENST00000604200 896 ntBASIC21.17■□□□□ 0.98
SHOXO15266 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.17■□□□□ 0.98
SHOXO15266 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHOXO15266 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.17■□□□□ 0.98
SHOXO15266 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.17■□□□□ 0.98
SHOXO15266 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.16■□□□□ 0.98
SHOXO15266 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHOXO15266 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SHOXO15266 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHOXO15266 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHOXO15266 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.15■□□□□ 0.98
SHOXO15266 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHOXO15266 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHOXO15266 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHOXO15266 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHOXO15266 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SHOXO15266 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHOXO15266 AC079834.2-201ENST00000609776 1949 ntBASIC21.13■□□□□ 0.97
SHOXO15266 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHOXO15266 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHOXO15266 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHOXO15266 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHOXO15266 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.12■□□□□ 0.97
SHOXO15266 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.11■□□□□ 0.97
SHOXO15266 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SHOXO15266 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.11■□□□□ 0.97
SHOXO15266 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHOXO15266 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHOXO15266 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHOXO15266 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHOXO15266 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHOXO15266 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.1■□□□□ 0.97
SHOXO15266 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHOXO15266 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHOXO15266 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHOXO15266 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHOXO15266 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.09■□□□□ 0.97
SHOXO15266 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHOXO15266 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHOXO15266 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SHOXO15266 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHOXO15266 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHOXO15266 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHOXO15266 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SHOXO15266 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.07■□□□□ 0.96
SHOXO15266 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHOXO15266 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHOXO15266 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHOXO15266 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SHOXO15266 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHOXO15266 AL139393.2-201ENST00000608721 2025 ntBASIC21.06■□□□□ 0.96
SHOXO15266 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHOXO15266 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHOXO15266 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHOXO15266 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHOXO15266 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHOXO15266 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SHOXO15266 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms