Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238C9JI98 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238C9JI98 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 AC079834.2-201ENST00000609776 1949 ntBASIC17.5■□□□□ 0.39
TMEM238C9JI98 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM238C9JI98 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238C9JI98 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238C9JI98 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238C9JI98 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238C9JI98 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238C9JI98 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238C9JI98 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM238C9JI98 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238C9JI98 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238C9JI98 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238C9JI98 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238C9JI98 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM238C9JI98 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM238C9JI98 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM238C9JI98 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238C9JI98 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238C9JI98 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238C9JI98 AC006077.2-201ENST00000623591 457 ntBASIC17.45■□□□□ 0.38
TMEM238C9JI98 AL121603.2-201ENST00000557373 2117 ntBASIC17.45■□□□□ 0.38
TMEM238C9JI98 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM238C9JI98 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEM238C9JI98 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM238C9JI98 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM238C9JI98 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 AC012676.1-201ENST00000574705 1949 ntBASIC17.44■□□□□ 0.38
TMEM238C9JI98 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TMEM238C9JI98 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238C9JI98 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM238C9JI98 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM238C9JI98 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM238C9JI98 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM238C9JI98 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM238C9JI98 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM238C9JI98 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM238C9JI98 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM238C9JI98 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM238C9JI98 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM238C9JI98 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM238C9JI98 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM238C9JI98 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM238C9JI98 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM238C9JI98 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM238C9JI98 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM238C9JI98 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM238C9JI98 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM238C9JI98 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.39■□□□□ 0.38
TMEM238C9JI98 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM238C9JI98 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM238C9JI98 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM238C9JI98 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM238C9JI98 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM238C9JI98 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TMEM238C9JI98 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM238C9JI98 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM238C9JI98 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM238C9JI98 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM238C9JI98 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM238C9JI98 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM238C9JI98 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM238C9JI98 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM238C9JI98 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms