Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 DUX4L14-201ENST00000621227 1267 ntBASIC23.34■■□□□ 1.33
CLCA1A8K7I4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCA1A8K7I4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCA1A8K7I4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCA1A8K7I4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCA1A8K7I4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCA1A8K7I4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCA1A8K7I4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCA1A8K7I4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCA1A8K7I4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.28■■□□□ 1.32
CLCA1A8K7I4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CLCA1A8K7I4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.27■■□□□ 1.32
CLCA1A8K7I4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CLCA1A8K7I4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.26■■□□□ 1.31
CLCA1A8K7I4 MIR3648-2-201ENST00000581792 180 ntBASIC23.26■■□□□ 1.31
CLCA1A8K7I4 MIR3648-1-201ENST00000615959 180 ntBASIC23.26■■□□□ 1.31
CLCA1A8K7I4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.26■■□□□ 1.31
CLCA1A8K7I4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCA1A8K7I4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.26■■□□□ 1.31
CLCA1A8K7I4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCA1A8K7I4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 AP004833.2-201ENST00000532228 1454 ntBASIC23.25■■□□□ 1.31
CLCA1A8K7I4 LINC00273-201ENST00000539813 1452 ntBASIC23.25■■□□□ 1.31
CLCA1A8K7I4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCA1A8K7I4 LINC01003-201ENST00000564834 1764 ntBASIC23.24■■□□□ 1.31
CLCA1A8K7I4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 AC127502.1-201ENST00000399971 1502 ntBASIC23.24■■□□□ 1.31
CLCA1A8K7I4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 AL449106.1-201ENST00000608517 1980 ntBASIC23.24■■□□□ 1.31
CLCA1A8K7I4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 CR559946.2-201ENST00000623684 991 ntBASIC23.24■■□□□ 1.31
CLCA1A8K7I4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCA1A8K7I4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCA1A8K7I4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.23■■□□□ 1.31
CLCA1A8K7I4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCA1A8K7I4 AC016575.1-201ENST00000607026 382 ntBASIC23.23■■□□□ 1.31
CLCA1A8K7I4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCA1A8K7I4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CLCA1A8K7I4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.21■■□□□ 1.31
CLCA1A8K7I4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLCA1A8K7I4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L13-201ENST00000554103 1267 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L15-201ENST00000611059 1267 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L23-201ENST00000615195 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L24-201ENST00000617576 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L22-201ENST00000618238 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L20-201ENST00000619712 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L21-201ENST00000622058 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L10-201ENST00000622460 1267 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 DUX4L25-201ENST00000624915 1269 ntBASIC23.2■■□□□ 1.3
CLCA1A8K7I4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCA1A8K7I4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms