Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H12DA2A288 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ZC3H12DA2A288 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H12DA2A288 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.93■■□□□ 1.26
ZC3H12DA2A288 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H12DA2A288 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H12DA2A288 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.92■■□□□ 1.26
ZC3H12DA2A288 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 ZNRF2P2-203ENST00000454624 420 ntBASIC22.91■■□□□ 1.26
ZC3H12DA2A288 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H12DA2A288 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3H12DA2A288 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
ZC3H12DA2A288 LINC01971-201ENST00000617888 1048 ntBASIC22.9■■□□□ 1.26
ZC3H12DA2A288 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.9■■□□□ 1.26
ZC3H12DA2A288 ABHD17AP4-201ENST00000411545 909 ntBASIC22.89■■□□□ 1.25
ZC3H12DA2A288 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.89■■□□□ 1.25
ZC3H12DA2A288 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
ZC3H12DA2A288 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H12DA2A288 AC110285.7-201ENST00000624417 1536 ntBASIC22.88■■□□□ 1.25
ZC3H12DA2A288 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.88■■□□□ 1.25
ZC3H12DA2A288 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
ZC3H12DA2A288 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H12DA2A288 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 LINC01003-201ENST00000564834 1764 ntBASIC22.87■■□□□ 1.25
ZC3H12DA2A288 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H12DA2A288 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.86■■□□□ 1.25
ZC3H12DA2A288 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H12DA2A288 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H12DA2A288 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H12DA2A288 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H12DA2A288 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H12DA2A288 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H12DA2A288 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H12DA2A288 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.85■■□□□ 1.25
ZC3H12DA2A288 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.84■■□□□ 1.25
ZC3H12DA2A288 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.84■■□□□ 1.25
ZC3H12DA2A288 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.84■■□□□ 1.25
ZC3H12DA2A288 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H12DA2A288 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H12DA2A288 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.83■■□□□ 1.25
ZC3H12DA2A288 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ZC3H12DA2A288 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ZC3H12DA2A288 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
ZC3H12DA2A288 DUX4L11-201ENST00000611504 1267 ntBASIC22.82■■□□□ 1.24
ZC3H12DA2A288 DUX4L12-201ENST00000614593 1267 ntBASIC22.82■■□□□ 1.24
ZC3H12DA2A288 DUX4L14-201ENST00000621227 1267 ntBASIC22.82■■□□□ 1.24
ZC3H12DA2A288 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.81■■□□□ 1.24
ZC3H12DA2A288 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H12DA2A288 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H12DA2A288 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H12DA2A288 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.8■■□□□ 1.24
ZC3H12DA2A288 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ZC3H12DA2A288 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ZC3H12DA2A288 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L13-201ENST00000554103 1267 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L15-201ENST00000611059 1267 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L23-201ENST00000615195 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L24-201ENST00000617576 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L22-201ENST00000618238 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L20-201ENST00000619712 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L21-201ENST00000622058 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L10-201ENST00000622460 1267 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 DUX4L25-201ENST00000624915 1269 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.8■■□□□ 1.24
ZC3H12DA2A288 AC018358.1-201ENST00000631079 1402 ntBASIC22.8■■□□□ 1.24
ZC3H12DA2A288 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ZC3H12DA2A288 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
ZC3H12DA2A288 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.78■■□□□ 1.24
ZC3H12DA2A288 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
ZC3H12DA2A288 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.78■■□□□ 1.24
ZC3H12DA2A288 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.78■■□□□ 1.24
ZC3H12DA2A288 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.77■■□□□ 1.24
ZC3H12DA2A288 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ZC3H12DA2A288 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ZC3H12DA2A288 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ZC3H12DA2A288 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms