Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RNF103-CHMP3A0A140T963 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24■■□□□ 1.43
RNF103-CHMP3A0A140T963 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF103-CHMP3A0A140T963 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF103-CHMP3A0A140T963 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF103-CHMP3A0A140T963 AP006261.1-201ENST00000584783 668 ntBASIC23.98■■□□□ 1.43
RNF103-CHMP3A0A140T963 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RNF103-CHMP3A0A140T963 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.96■■□□□ 1.43
RNF103-CHMP3A0A140T963 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF103-CHMP3A0A140T963 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF103-CHMP3A0A140T963 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RNF103-CHMP3A0A140T963 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RNF103-CHMP3A0A140T963 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF103-CHMP3A0A140T963 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 AC135983.2-203ENST00000454486 1613 ntBASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF103-CHMP3A0A140T963 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF103-CHMP3A0A140T963 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF103-CHMP3A0A140T963 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF103-CHMP3A0A140T963 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 LINC01003-201ENST00000564834 1764 ntBASIC23.91■■□□□ 1.42
RNF103-CHMP3A0A140T963 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF103-CHMP3A0A140T963 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF103-CHMP3A0A140T963 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
RNF103-CHMP3A0A140T963 WHAMMP2-203ENST00000563942 1603 ntBASIC23.9■■□□□ 1.42
RNF103-CHMP3A0A140T963 AP002414.2-202ENST00000590929 1450 ntBASIC23.89■■□□□ 1.42
RNF103-CHMP3A0A140T963 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF103-CHMP3A0A140T963 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF103-CHMP3A0A140T963 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF103-CHMP3A0A140T963 LINC00273-201ENST00000539813 1452 ntBASIC23.88■■□□□ 1.41
RNF103-CHMP3A0A140T963 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF103-CHMP3A0A140T963 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF103-CHMP3A0A140T963 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF103-CHMP3A0A140T963 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF103-CHMP3A0A140T963 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF103-CHMP3A0A140T963 AC087741.3-201ENST00000624270 1347 ntBASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 AL162393.1-201ENST00000437852 946 ntBASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF103-CHMP3A0A140T963 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF103-CHMP3A0A140T963 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF103-CHMP3A0A140T963 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF103-CHMP3A0A140T963 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.84■■□□□ 1.41
RNF103-CHMP3A0A140T963 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF103-CHMP3A0A140T963 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF103-CHMP3A0A140T963 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF103-CHMP3A0A140T963 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF103-CHMP3A0A140T963 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF103-CHMP3A0A140T963 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF103-CHMP3A0A140T963 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.83■■□□□ 1.41
RNF103-CHMP3A0A140T963 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF103-CHMP3A0A140T963 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF103-CHMP3A0A140T963 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF103-CHMP3A0A140T963 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF103-CHMP3A0A140T963 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF103-CHMP3A0A140T963 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF103-CHMP3A0A140T963 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF103-CHMP3A0A140T963 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF103-CHMP3A0A140T963 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF103-CHMP3A0A140T963 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF103-CHMP3A0A140T963 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF103-CHMP3A0A140T963 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF103-CHMP3A0A140T963 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF103-CHMP3A0A140T963 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF103-CHMP3A0A140T963 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms