Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV16A0A0A6YYK6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRAV16A0A0A6YYK6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 AC005559.1-201ENST00000589661 871 ntBASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV16A0A0A6YYK6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV16A0A0A6YYK6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV16A0A0A6YYK6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV16A0A0A6YYK6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV16A0A0A6YYK6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV16A0A0A6YYK6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV16A0A0A6YYK6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV16A0A0A6YYK6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV16A0A0A6YYK6 MIR3665-201ENST00000578708 105 ntBASIC17.27■□□□□ 0.36
TRAV16A0A0A6YYK6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV16A0A0A6YYK6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV16A0A0A6YYK6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRAV16A0A0A6YYK6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TRAV16A0A0A6YYK6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV16A0A0A6YYK6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV16A0A0A6YYK6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV16A0A0A6YYK6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TRAV16A0A0A6YYK6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV16A0A0A6YYK6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV16A0A0A6YYK6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV16A0A0A6YYK6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV16A0A0A6YYK6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV16A0A0A6YYK6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 AC093323.1-202ENST00000635031 2045 ntBASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV16A0A0A6YYK6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV16A0A0A6YYK6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV16A0A0A6YYK6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 AC020928.2-201ENST00000588717 2197 ntBASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 AC091060.1-201ENST00000623524 1766 ntBASIC17.2■□□□□ 0.34
TRAV16A0A0A6YYK6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV16A0A0A6YYK6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV16A0A0A6YYK6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms