Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV6A0A075B6T7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV6A0A075B6T7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRAV6A0A075B6T7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV6A0A075B6T7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV6A0A075B6T7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV6A0A075B6T7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV6A0A075B6T7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV6A0A075B6T7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV6A0A075B6T7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
TRAV6A0A075B6T7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV6A0A075B6T7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV6A0A075B6T7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAV6A0A075B6T7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV6A0A075B6T7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.43■■□□□ 1.02
TRAV6A0A075B6T7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV6A0A075B6T7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAV6A0A075B6T7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV6A0A075B6T7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV6A0A075B6T7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV6A0A075B6T7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRAV6A0A075B6T7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV6A0A075B6T7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV6A0A075B6T7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV6A0A075B6T7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAV6A0A075B6T7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV6A0A075B6T7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV6A0A075B6T7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV6A0A075B6T7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV6A0A075B6T7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV6A0A075B6T7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 DUSP8P4-201ENST00000399538 1761 ntBASIC21.36■■□□□ 1.01
TRAV6A0A075B6T7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV6A0A075B6T7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV6A0A075B6T7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAV6A0A075B6T7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV6A0A075B6T7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV6A0A075B6T7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV6A0A075B6T7 WASH5P-204ENST00000632292 975 ntBASIC21.33■■□□□ 1.01
TRAV6A0A075B6T7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV6A0A075B6T7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV6A0A075B6T7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV6A0A075B6T7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV6A0A075B6T7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV6A0A075B6T7 AC100797.4-201ENST00000631653 1827 ntBASIC21.32■■□□□ 1
TRAV6A0A075B6T7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV6A0A075B6T7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.31■■□□□ 1
TRAV6A0A075B6T7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV6A0A075B6T7 AC092803.2-201ENST00000564287 1899 ntBASIC21.31■■□□□ 1
TRAV6A0A075B6T7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV6A0A075B6T7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV6A0A075B6T7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV6A0A075B6T7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRAV6A0A075B6T7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV6A0A075B6T7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV6A0A075B6T7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms