Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 AC079834.2-201ENST00000609776 1949 ntBASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV20-1A0A075B6N2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV20-1A0A075B6N2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV20-1A0A075B6N2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV20-1A0A075B6N2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV20-1A0A075B6N2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV20-1A0A075B6N2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV20-1A0A075B6N2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV20-1A0A075B6N2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV20-1A0A075B6N2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV20-1A0A075B6N2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV20-1A0A075B6N2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV20-1A0A075B6N2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV20-1A0A075B6N2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRBV20-1A0A075B6N2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV20-1A0A075B6N2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV20-1A0A075B6N2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV20-1A0A075B6N2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV20-1A0A075B6N2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV20-1A0A075B6N2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV20-1A0A075B6N2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV20-1A0A075B6N2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV20-1A0A075B6N2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV20-1A0A075B6N2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 CLDN5-201ENST00000403084 2357 ntBASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV20-1A0A075B6N2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 LINC01003-201ENST00000564834 1764 ntBASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV20-1A0A075B6N2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV20-1A0A075B6N2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV20-1A0A075B6N2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV20-1A0A075B6N2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV20-1A0A075B6N2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRBV20-1A0A075B6N2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV20-1A0A075B6N2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRBV20-1A0A075B6N2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV20-1A0A075B6N2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV20-1A0A075B6N2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV20-1A0A075B6N2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV20-1A0A075B6N2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms