RNA–Protein interactions for RNA: snR6

snR6, Transcript of U6 spliceosomal RNA (U6 snRNA), yeastyeast

Gene snR6, Length 112 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR6snR6 FAP1P53971 965 aa2.6□□□□□ -1.99
snR6snR6 PRY3P47033 881 aa2.44□□□□□ -2.02
snR6snR6 HAA1Q12753 694 aaKnown RBP2.24□□□□□ -2.05
snR6snR6 BUD31P25337 157 aaPredicted RBP2.17□□□□□ -2.06
snR6snR6 YCK3P39962 524 aa2.06□□□□□ -2.08
snR6snR6 SIS1P25294 352 aaKnown RBP2.02□□□□□ -2.09
snR6snR6 AAD16Q02895 342 aa1.94□□□□□ -2.1
snR6snR6 YGL015CP33199 130 aa1.88□□□□□ -2.11
snR6snR6 PRI1P10363 409 aa1.79□□□□□ -2.12
snR6snR6 UBP9P39967 754 aa1.79□□□□□ -2.12
snR6snR6 RGA2Q06407 1009 aa1.76□□□□□ -2.13
snR6snR6 MRPL32P25348 183 aa1.65□□□□□ -2.15
snR6snR6 TSR3Q12094 313 aaKnown RBP1.63□□□□□ -2.15
snR6snR6 YJL171CP46992 396 aa1.55□□□□□ -2.16
snR6snR6 RGA1P39083 1007 aa1.52□□□□□ -2.17
snR6snR6 ISW2Q08773 1120 aa1.49□□□□□ -2.17
snR6snR6 TIF4632P39936 914 aaKnown RBP1.48□□□□□ -2.17
snR6snR6 UBP10P53874 792 aaPredicted RBP1.46□□□□□ -2.18
snR6snR6 RPG1P38249 964 aaKnown RBP1.44□□□□□ -2.18
snR6snR6 TGL3P40308 642 aa1.41□□□□□ -2.18
snR6snR6 MTC1P47018 478 aaKnown RBP1.41□□□□□ -2.18
snR6snR6 MAP2P38174 421 aaKnown RBP1.38□□□□□ -2.19
snR6snR6 BMT6Q12291 365 aa1.37□□□□□ -2.19
snR6snR6 YBL029C-AQ3E756 94 aa1.37□□□□□ -2.19
snR6snR6 AIR2Q12476 344 aaKnown RBP1.36□□□□□ -2.19
snR6snR6 SPP1Q03012 353 aa1.33□□□□□ -2.2
snR6snR6 FKH1P40466 484 aa1.32□□□□□ -2.2
snR6snR6 BCK2P33306 851 aa1.28□□□□□ -2.2
snR6snR6 VNX1P42839 908 aa1.28□□□□□ -2.2
snR6snR6 SLX5P32828 619 aaKnown RBP1.27□□□□□ -2.21
snR6snR6 SCY1P53009 804 aa1.26□□□□□ -2.21
snR6snR6 CDC27P38042 758 aa1.24□□□□□ -2.21
snR6snR6 DPS1P04802 557 aaKnown RBP1.22□□□□□ -2.21
snR6snR6 TIF11P38912 153 aaKnown RBP1.21□□□□□ -2.22
snR6snR6 LDB19Q12502 818 aa1.21□□□□□ -2.22
snR6snR6 WSC3Q12215 556 aa1.19□□□□□ -2.22
snR6snR6 YPL062WQ02781 134 aa1.18□□□□□ -2.22
snR6snR6 YOR238WQ08634 303 aa1.18□□□□□ -2.22
snR6snR6 NCR1Q12200 1170 aa1.17□□□□□ -2.22
snR6snR6 MST1P07236 462 aa1.16□□□□□ -2.22
snR6snR6 XDJ1P39102 459 aa1.15□□□□□ -2.23
snR6snR6 AVT3P36062 692 aa1.14□□□□□ -2.23
snR6snR6 REB1P21538 810 aa1.11□□□□□ -2.23
snR6snR6 CHL1P22516 861 aaPredicted RBP1.11□□□□□ -2.23
snR6snR6 ULI1P43604 169 aa1.11□□□□□ -2.23
snR6snR6 GBP2P25555 427 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
snR6snR6 GTT3P39996 337 aa1.1□□□□□ -2.23
snR6snR6 TFG1P41895 735 aaPredicted RBP1.1□□□□□ -2.23
snR6snR6 SRC1Q03707 834 aa1.1□□□□□ -2.23
snR6snR6 RTG1P32607 177 aa1.07□□□□□ -2.24
snR6snR6 VRP1P37370 817 aa1.07□□□□□ -2.24
snR6snR6 IOC2Q12072 812 aa1.07□□□□□ -2.24
snR6snR6 PRE3P38624 215 aa1.05□□□□□ -2.24
snR6snR6 EAP1P36041 632 aaKnown RBP1.04□□□□□ -2.24
snR6snR6 MTC5Q03897 1148 aa1.04□□□□□ -2.24
snR6snR6 SEC61P32915 480 aa1.03□□□□□ -2.24
snR6snR6 SAP30P38429 201 aa1.03□□□□□ -2.24
snR6snR6 DCD1P06773 312 aa1.02□□□□□ -2.25
snR6snR6 YAP5P40574 245 aa1.02□□□□□ -2.25
snR6snR6 NSR1P27476 414 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
snR6snR6 HOP09932 586 aa1□□□□□ -2.25
snR6snR6 TFC8Q12308 588 aa1□□□□□ -2.25
snR6snR6 TRK1P12685 1235 aa0.99□□□□□ -2.25
snR6snR6 GAR1P28007 205 aaKnown RBP0.99□□□□□ -2.25
snR6snR6 YNL035CP53962 389 aaKnown RBP0.99□□□□□ -2.25
snR6snR6 PEX29Q03370 554 aa0.99□□□□□ -2.25
snR6snR6 YKR023WP36119 530 aaKnown RBP0.98□□□□□ -2.25
snR6snR6 MSB4Q12317 492 aa0.98□□□□□ -2.25
snR6snR6 YDL129WQ07555 291 aa0.95□□□□□ -2.26
snR6snR6 RPL17AP05740 184 aaKnown RBP0.94□□□□□ -2.26
snR6snR6 RPL17BP46990 184 aaKnown RBP0.94□□□□□ -2.26
snR6snR6 TRP5P00931 707 aaKnown RBP0.93□□□□□ -2.26
snR6snR6 NRD1P53617 575 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
snR6snR6 RSE1Q04693 1361 aaKnown RBP0.93□□□□□ -2.26
snR6snR6 DAN4P47179 1161 aa0.92□□□□□ -2.26
snR6snR6 BCH2P36122 765 aa0.91□□□□□ -2.26
snR6snR6 ELP4Q02884 456 aaKnown RBP0.91□□□□□ -2.26
snR6snR6 GCR2Q01722 534 aa0.89□□□□□ -2.27
snR6snR6 SET4P42948 560 aa0.88□□□□□ -2.27
snR6snR6 JIP4Q03361 876 aa0.87□□□□□ -2.27
snR6snR6 BRE2P43132 505 aa0.86□□□□□ -2.27
snR6snR6 BDF1P35817 686 aa0.85□□□□□ -2.27
snR6snR6 YOL036WQ08206 761 aa0.85□□□□□ -2.27
snR6snR6 RAS1P01119 309 aa0.84□□□□□ -2.27
snR6snR6 EPS1P40557 701 aa0.83□□□□□ -2.28
snR6snR6 AMS1P22855 1083 aa0.8□□□□□ -2.28
snR6snR6 OXP1P28273 1286 aa0.8□□□□□ -2.28
snR6snR6 SPT23P35210 1082 aa0.8□□□□□ -2.28
snR6snR6 LSB3P43603 459 aaKnown RBP0.8□□□□□ -2.28
snR6snR6 PIB1Q06651 286 aa0.8□□□□□ -2.28
snR6snR6 PUS1Q12211 544 aaKnown RBP0.8□□□□□ -2.28
snR6snR6 ENV9Q08651 330 aa0.78□□□□□ -2.28
snR6snR6 ABP1P15891 592 aaKnown RBP0.77□□□□□ -2.29
snR6snR6 ARH1P48360 493 aa0.77□□□□□ -2.29
snR6snR6 PTC2P39966 464 aaKnown RBP0.76□□□□□ -2.29
snR6snR6 YFR006WP43590 535 aa0.76□□□□□ -2.29
snR6snR6 YDR444WQ04093 687 aa0.76□□□□□ -2.29
snR6snR6 SBP1P10080 294 aaKnown RBP0.75□□□□□ -2.29
snR6snR6 MET22P32179 357 aa0.75□□□□□ -2.29
snR6snR6 SPT21P35209 758 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms