RNA–Protein interactions for RNA: YPR182W

SMX3, Transcript of Core Sm protein Sm F, yeastyeast

Gene SMX3, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMX3YPR182W SGS1P35187 1447 aa12.51□□□□□ -0.41
SMX3YPR182W INO80P53115 1489 aa12.38□□□□□ -0.43
SMX3YPR182W MON2P48563 1636 aaPredicted RBP12.35□□□□□ -0.43
SMX3YPR182W TCB3Q03640 1545 aaKnown RBP12.3□□□□□ -0.44
SMX3YPR182W TY1B-DR4Q07793 1604 aa12.19□□□□□ -0.46
SMX3YPR182W SWR1Q05471 1514 aa11.99□□□□□ -0.49
SMX3YPR182W HSL1P34244 1518 aa11.87□□□□□ -0.51
SMX3YPR182W SPA2P23201 1466 aaKnown RBP11.83□□□□□ -0.52
SMX3YPR182W SPT6P23615 1451 aaKnown RBP11.83□□□□□ -0.52
SMX3YPR182W SSN2P38931 1420 aa11.81□□□□□ -0.52
SMX3YPR182W DNA2P38859 1522 aa11.72□□□□□ -0.53
SMX3YPR182W KOG1P38873 1557 aa11.67□□□□□ -0.54
SMX3YPR182W HIR3P47171 1648 aa11.65□□□□□ -0.54
SMX3YPR182W XRN1P22147 1528 aaKnown RBP11.51□□□□□ -0.57
SMX3YPR182W DRS1P32892 752 aaKnown RBP11.43□□□□□ -0.58
SMX3YPR182W THO2P53552 1597 aaKnown RBP11.37□□□□□ -0.59
SMX3YPR182W REV3P14284 1504 aa11.35□□□□□ -0.59
SMX3YPR182W BUD4P47136 1447 aa11.33□□□□□ -0.6
SMX3YPR182W ECM5Q03214 1411 aa11.31□□□□□ -0.6
SMX3YPR182W SIN3P22579 1536 aa11.3□□□□□ -0.6
SMX3YPR182W SSK2P53599 1579 aa11.2□□□□□ -0.62
SMX3YPR182W ATG2P53855 1592 aa11.18□□□□□ -0.62
SMX3YPR182W MDS3P53094 1487 aa11.15□□□□□ -0.62
SMX3YPR182W PEP1P32319 1579 aa11.15□□□□□ -0.62
SMX3YPR182W TAF2P23255 1407 aa11.14□□□□□ -0.63
SMX3YPR182W ESP1Q03018 1630 aa11.13□□□□□ -0.63
SMX3YPR182W MYO2P19524 1574 aaKnown RBP11.06□□□□□ -0.64
SMX3YPR182W SKI3P17883 1432 aaKnown RBP11.03□□□□□ -0.64
SMX3YPR182W YPK9Q12697 1472 aa10.98□□□□□ -0.65
SMX3YPR182W RSE1Q04693 1361 aaKnown RBP10.92□□□□□ -0.66
SMX3YPR182W SCC2Q04002 1493 aa10.87□□□□□ -0.67
SMX3YPR182W RPO31P04051 1460 aa10.84□□□□□ -0.67
SMX3YPR182W POL1P13382 1468 aa10.83□□□□□ -0.68
SMX3YPR182W UFD4P33202 1483 aa10.82□□□□□ -0.68
SMX3YPR182W BPT1P14772 1559 aa10.82□□□□□ -0.68
SMX3YPR182W YCF1P39109 1515 aaKnown RBP10.74□□□□□ -0.69
SMX3YPR182W RKR1Q04781 1562 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-LR1P0C2J3 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-FP0CX63 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-GR2P0CX64 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-CP25384 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-DR2Q03494 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY1B-DR1Q03855 1755 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-DR3Q07791 1770 aaKnown RBP10.74□□□□□ -0.69
SMX3YPR182W TY2B-OR1Q12113 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-DR1Q12472 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TY2B-OR2Q12501 1770 aa10.74□□□□□ -0.69
SMX3YPR182W TOP2P06786 1428 aaKnown RBP10.74□□□□□ -0.69
SMX3YPR182W STU1P38198 1513 aa10.74□□□□□ -0.69
SMX3YPR182W YOR1P53049 1477 aa10.68□□□□□ -0.7
SMX3YPR182W TY1B-DR3Q99231 1755 aa10.66□□□□□ -0.7
SMX3YPR182W SMC4Q12267 1418 aa10.66□□□□□ -0.7
SMX3YPR182W TY2B-BQ12491 1770 aa10.64□□□□□ -0.71
SMX3YPR182W YTA7P40340 1379 aa10.64□□□□□ -0.71
SMX3YPR182W TY1B-BRQ12193 1756 aa10.62□□□□□ -0.71
SMX3YPR182W TY1B-GR3Q12316 1755 aa10.62□□□□□ -0.71
SMX3YPR182W TY1B-ORQ92393 1755 aa10.62□□□□□ -0.71
SMX3YPR182W CDC25P04821 1589 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-HO13535 1793 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-DR5P0C2I2 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-DR6P0C2I3 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-LR2P0C2I5 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-LR3P0C2I6 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W TY1B-PR1P0C2I9 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W TY1B-PR2P0C2J0 1756 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-PR3P0C2J1 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W TY1B-JR1P47098 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-ML2Q03434 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W TY1B-ER1Q03612 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-ML1Q04711 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W TY1B-GR2Q12269 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-OLQ12273 1755 aa10.59□□□□□ -0.71
SMX3YPR182W TY1B-PLQ12414 1755 aaKnown RBP10.59□□□□□ -0.71
SMX3YPR182W CHD1P32657 1468 aa10.58□□□□□ -0.72
SMX3YPR182W MTC1P47018 478 aaKnown RBP10.58□□□□□ -0.72
SMX3YPR182W MYO4P32492 1471 aa10.56□□□□□ -0.72
SMX3YPR182W PAN1P32521 1480 aa10.52□□□□□ -0.73
SMX3YPR182W MMS22Q06164 1454 aa10.52□□□□□ -0.73
SMX3YPR182W SPP41P38904 1435 aa10.48□□□□□ -0.73
SMX3YPR182W ESC1Q03661 1658 aaKnown RBP10.47□□□□□ -0.73
SMX3YPR182W RQC2Q12532 1038 aaKnown RBP10.47□□□□□ -0.73
SMX3YPR182W DNF1P32660 1571 aa10.43□□□□□ -0.74
SMX3YPR182W RPA190P10964 1664 aaKnown RBP10.42□□□□□ -0.74
SMX3YPR182W TSC11P40061 1430 aa10.41□□□□□ -0.74
SMX3YPR182W TY1B-JR2P47100 1755 aaKnown RBP10.4□□□□□ -0.74
SMX3YPR182W TY1B-ER2Q03619 1755 aa10.4□□□□□ -0.74
SMX3YPR182W TY1B-MR1Q04214 1755 aa10.4□□□□□ -0.74
SMX3YPR182W TY1B-MR2Q04670 1755 aaKnown RBP10.4□□□□□ -0.74
SMX3YPR182W TY1B-LR1Q12088 1755 aaKnown RBP10.4□□□□□ -0.74
SMX3YPR182W TY1B-NL1Q12112 1755 aa10.4□□□□□ -0.74
SMX3YPR182W TY1B-GR1Q12141 1755 aa10.4□□□□□ -0.74
SMX3YPR182W TY1B-BLQ12490 1755 aa10.4□□□□□ -0.74
SMX3YPR182W VTH1P40438 1549 aa10.4□□□□□ -0.74
SMX3YPR182W VTH2P40890 1549 aa10.4□□□□□ -0.74
SMX3YPR182W SNQ2P32568 1501 aaKnown RBP10.38□□□□□ -0.75
SMX3YPR182W TRM732Q03496 1420 aa10.36□□□□□ -0.75
SMX3YPR182W SAS10Q12136 610 aaPredicted RBP10.33□□□□□ -0.76
SMX3YPR182W STH1P32597 1359 aa10.33□□□□□ -0.76
SMX3YPR182W MLP2P40457 1679 aa10.33□□□□□ -0.76
SMX3YPR182W MET5P47169 1442 aa10.32□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms