RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W SGS1P35187 1447 aa17.03■□□□□ 0.32
BRR1YPR057W INO80P53115 1489 aa16.73■□□□□ 0.27
BRR1YPR057W TCB3Q03640 1545 aaKnown RBP16.55■□□□□ 0.24
BRR1YPR057W MON2P48563 1636 aaPredicted RBP16.38■□□□□ 0.21
BRR1YPR057W TY1B-DR4Q07793 1604 aa16.3■□□□□ 0.2
BRR1YPR057W SSN2P38931 1420 aa16.18■□□□□ 0.18
BRR1YPR057W SPA2P23201 1466 aaKnown RBP16.17■□□□□ 0.18
BRR1YPR057W SWR1Q05471 1514 aa16.03■□□□□ 0.16
BRR1YPR057W HSL1P34244 1518 aa16■□□□□ 0.15
BRR1YPR057W SPT6P23615 1451 aaKnown RBP15.97■□□□□ 0.15
BRR1YPR057W HIR3P47171 1648 aa15.7■□□□□ 0.1
BRR1YPR057W DRS1P32892 752 aaKnown RBP15.7■□□□□ 0.1
BRR1YPR057W DNA2P38859 1522 aa15.63■□□□□ 0.09
BRR1YPR057W XRN1P22147 1528 aaKnown RBP15.59■□□□□ 0.09
BRR1YPR057W KOG1P38873 1557 aa15.53■□□□□ 0.08
BRR1YPR057W REV3P14284 1504 aa15.36■□□□□ 0.05
BRR1YPR057W SIN3P22579 1536 aa15.25■□□□□ 0.03
BRR1YPR057W BUD4P47136 1447 aa15.24■□□□□ 0.03
BRR1YPR057W ECM5Q03214 1411 aa15.22■□□□□ 0.03
BRR1YPR057W THO2P53552 1597 aaKnown RBP15.22■□□□□ 0.03
BRR1YPR057W TAF2P23255 1407 aa15.17■□□□□ 0.02
BRR1YPR057W SSK2P53599 1579 aa15.13■□□□□ 0.01
BRR1YPR057W ATG2P53855 1592 aa15.01□□□□□ -0.01
BRR1YPR057W MDS3P53094 1487 aa14.96□□□□□ -0.01
BRR1YPR057W ESP1Q03018 1630 aa14.96□□□□□ -0.01
BRR1YPR057W SKI3P17883 1432 aaKnown RBP14.96□□□□□ -0.01
BRR1YPR057W PEP1P32319 1579 aa14.94□□□□□ -0.02
BRR1YPR057W MYO2P19524 1574 aaKnown RBP14.9□□□□□ -0.02
BRR1YPR057W YPK9Q12697 1472 aa14.84□□□□□ -0.03
BRR1YPR057W POL1P13382 1468 aa14.73□□□□□ -0.05
BRR1YPR057W SCC2Q04002 1493 aa14.7□□□□□ -0.06
BRR1YPR057W RPO31P04051 1460 aa14.66□□□□□ -0.06
BRR1YPR057W STU1P38198 1513 aa14.63□□□□□ -0.07
BRR1YPR057W UFD4P33202 1483 aa14.62□□□□□ -0.07
BRR1YPR057W TOP2P06786 1428 aaKnown RBP14.54□□□□□ -0.08
BRR1YPR057W RKR1Q04781 1562 aa14.53□□□□□ -0.08
BRR1YPR057W YTA7P40340 1379 aa14.53□□□□□ -0.08
BRR1YPR057W YCF1P39109 1515 aaKnown RBP14.51□□□□□ -0.09
BRR1YPR057W CHD1P32657 1468 aa14.51□□□□□ -0.09
BRR1YPR057W YOR1P53049 1477 aa14.51□□□□□ -0.09
BRR1YPR057W RSE1Q04693 1361 aaKnown RBP14.5□□□□□ -0.09
BRR1YPR057W BPT1P14772 1559 aa14.47□□□□□ -0.09
BRR1YPR057W SMC4Q12267 1418 aa14.46□□□□□ -0.09
BRR1YPR057W MMS22Q06164 1454 aa14.43□□□□□ -0.1
BRR1YPR057W MYO4P32492 1471 aa14.37□□□□□ -0.11
BRR1YPR057W TY2B-LR1P0C2J3 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-FP0CX63 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-GR2P0CX64 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-CP25384 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-DR2Q03494 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY1B-DR1Q03855 1755 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-DR3Q07791 1770 aaKnown RBP14.34□□□□□ -0.11
BRR1YPR057W TY2B-OR1Q12113 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-DR1Q12472 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY2B-OR2Q12501 1770 aa14.34□□□□□ -0.11
BRR1YPR057W TY1B-DR3Q99231 1755 aa14.25□□□□□ -0.13
BRR1YPR057W SAS10Q12136 610 aaPredicted RBP14.25□□□□□ -0.13
BRR1YPR057W RQC2Q12532 1038 aaKnown RBP14.24□□□□□ -0.13
BRR1YPR057W SPP41P38904 1435 aa14.22□□□□□ -0.13
BRR1YPR057W TY2B-BQ12491 1770 aa14.21□□□□□ -0.13
BRR1YPR057W CDC25P04821 1589 aa14.2□□□□□ -0.14
BRR1YPR057W MTC1P47018 478 aaKnown RBP14.19□□□□□ -0.14
BRR1YPR057W PAN1P32521 1480 aa14.17□□□□□ -0.14
BRR1YPR057W TY1B-BRQ12193 1756 aa14.17□□□□□ -0.14
BRR1YPR057W TY1B-GR3Q12316 1755 aa14.17□□□□□ -0.14
BRR1YPR057W TY1B-ORQ92393 1755 aa14.17□□□□□ -0.14
BRR1YPR057W SNQ2P32568 1501 aaKnown RBP14.15□□□□□ -0.14
BRR1YPR057W STH1P32597 1359 aa14.14□□□□□ -0.15
BRR1YPR057W TAF7Q05021 590 aa14.14□□□□□ -0.15
BRR1YPR057W TY1B-HO13535 1793 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-DR5P0C2I2 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-DR6P0C2I3 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-LR2P0C2I5 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-LR3P0C2I6 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TY1B-PR1P0C2I9 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TY1B-PR2P0C2J0 1756 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-PR3P0C2J1 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TY1B-JR1P47098 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-ML2Q03434 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TY1B-ER1Q03612 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-ML1Q04711 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TY1B-GR2Q12269 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-OLQ12273 1755 aa14.12□□□□□ -0.15
BRR1YPR057W TY1B-PLQ12414 1755 aaKnown RBP14.12□□□□□ -0.15
BRR1YPR057W TSC11P40061 1430 aa14.12□□□□□ -0.15
BRR1YPR057W VTH1P40438 1549 aa14.06□□□□□ -0.16
BRR1YPR057W VTH2P40890 1549 aa14.06□□□□□ -0.16
BRR1YPR057W DNF1P32660 1571 aa14.01□□□□□ -0.17
BRR1YPR057W TRM732Q03496 1420 aa14.01□□□□□ -0.17
BRR1YPR057W SNT2P53127 1403 aa13.98□□□□□ -0.17
BRR1YPR057W PDR15Q04182 1529 aaKnown RBP13.95□□□□□ -0.18
BRR1YPR057W ESC1Q03661 1658 aaKnown RBP13.93□□□□□ -0.18
BRR1YPR057W IFH1P39520 1085 aa13.91□□□□□ -0.18
BRR1YPR057W RPA190P10964 1664 aaKnown RBP13.91□□□□□ -0.18
BRR1YPR057W MLP2P40457 1679 aa13.91□□□□□ -0.18
BRR1YPR057W ULS1Q08562 1619 aa13.9□□□□□ -0.18
BRR1YPR057W GEA1P47102 1408 aaPredicted RBP13.9□□□□□ -0.19
BRR1YPR057W TY1B-JR2P47100 1755 aaKnown RBP13.88□□□□□ -0.19
BRR1YPR057W TY1B-ER2Q03619 1755 aa13.88□□□□□ -0.19
BRR1YPR057W TY1B-MR1Q04214 1755 aa13.88□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms