RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W FAP1P53971 965 aa4.86□□□□□ -1.63
SEC8YPR055W PRY3P47033 881 aa4.56□□□□□ -1.68
SEC8YPR055W HAA1Q12753 694 aaKnown RBP4.21□□□□□ -1.74
SEC8YPR055W MTC1P47018 478 aaKnown RBP4.1□□□□□ -1.75
SEC8YPR055W DRS1P32892 752 aaKnown RBP4.03□□□□□ -1.76
SEC8YPR055W AAD16Q02895 342 aa3.94□□□□□ -1.78
SEC8YPR055W YCK3P39962 524 aa3.86□□□□□ -1.79
SEC8YPR055W BUD31P25337 157 aaPredicted RBP3.81□□□□□ -1.8
SEC8YPR055W SIS1P25294 352 aaKnown RBP3.71□□□□□ -1.82
SEC8YPR055W PRI1P10363 409 aa3.67□□□□□ -1.82
SEC8YPR055W YGL015CP33199 130 aa3.66□□□□□ -1.82
SEC8YPR055W MRPL32P25348 183 aa3.49□□□□□ -1.85
SEC8YPR055W TSR3Q12094 313 aaKnown RBP3.48□□□□□ -1.85
SEC8YPR055W DIP2Q12220 943 aaPredicted RBP3.45□□□□□ -1.86
SEC8YPR055W UBP9P39967 754 aa3.42□□□□□ -1.86
SEC8YPR055W BFR2Q06631 534 aaKnown RBP3.42□□□□□ -1.86
SEC8YPR055W ISW2Q08773 1120 aa3.37□□□□□ -1.87
SEC8YPR055W AVT3P36062 692 aa3.35□□□□□ -1.87
SEC8YPR055W RPG1P38249 964 aaKnown RBP3.35□□□□□ -1.87
SEC8YPR055W RSE1Q04693 1361 aaKnown RBP3.27□□□□□ -1.89
SEC8YPR055W RPL17AP05740 184 aaKnown RBP3.2□□□□□ -1.9
SEC8YPR055W RPL17BP46990 184 aaKnown RBP3.2□□□□□ -1.9
SEC8YPR055W REB1P21538 810 aa3.16□□□□□ -1.9
SEC8YPR055W TFA1P36100 482 aa3.07□□□□□ -1.92
SEC8YPR055W TIF4632P39936 914 aaKnown RBP3.06□□□□□ -1.92
SEC8YPR055W YJL171CP46992 396 aa3.06□□□□□ -1.92
SEC8YPR055W UBP10P53874 792 aaPredicted RBP3.04□□□□□ -1.92
SEC8YPR055W SPT21P35209 758 aa3.04□□□□□ -1.92
SEC8YPR055W DCD1P06773 312 aa2.99□□□□□ -1.93
SEC8YPR055W YKR023WP36119 530 aaKnown RBP2.98□□□□□ -1.93
SEC8YPR055W CDC27P38042 758 aa2.98□□□□□ -1.93
SEC8YPR055W HOP09932 586 aa2.98□□□□□ -1.93
SEC8YPR055W MAP2P38174 421 aaKnown RBP2.96□□□□□ -1.94
SEC8YPR055W RIM101P33400 625 aa2.94□□□□□ -1.94
SEC8YPR055W TGL3P40308 642 aa2.94□□□□□ -1.94
SEC8YPR055W TFC8Q12308 588 aa2.91□□□□□ -1.94
SEC8YPR055W RGA2Q06407 1009 aa2.9□□□□□ -1.94
SEC8YPR055W OXP1P28273 1286 aa2.9□□□□□ -1.95
SEC8YPR055W YAH1Q12184 172 aaKnown RBP2.89□□□□□ -1.95
SEC8YPR055W PTP3P40048 928 aa2.87□□□□□ -1.95
SEC8YPR055W BCH2P36122 765 aa2.84□□□□□ -1.95
SEC8YPR055W YIL055CP40523 627 aaKnown RBP2.84□□□□□ -1.95
SEC8YPR055W SCY1P53009 804 aa2.84□□□□□ -1.95
SEC8YPR055W SLX5P32828 619 aaKnown RBP2.83□□□□□ -1.96
SEC8YPR055W YBL029C-AQ3E756 94 aa2.8□□□□□ -1.96
SEC8YPR055W YLR271WQ06152 274 aa2.79□□□□□ -1.96
SEC8YPR055W SPP1Q03012 353 aa2.79□□□□□ -1.96
SEC8YPR055W BMT6Q12291 365 aa2.79□□□□□ -1.96
SEC8YPR055W RSM7P47150 247 aa2.78□□□□□ -1.96
SEC8YPR055W EPS1P40557 701 aa2.77□□□□□ -1.97
SEC8YPR055W SSP1P38871 571 aa2.77□□□□□ -1.97
SEC8YPR055W AI2P03876 854 aa2.76□□□□□ -1.97
SEC8YPR055W BDF1P35817 686 aa2.76□□□□□ -1.97
SEC8YPR055W AIR2Q12476 344 aaKnown RBP2.74□□□□□ -1.97
SEC8YPR055W CST9Q06032 482 aa2.73□□□□□ -1.97
SEC8YPR055W BBC1P47068 1157 aa2.72□□□□□ -1.97
SEC8YPR055W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98 RIP-Chip
SEC8YPR055W VNX1P42839 908 aa2.7□□□□□ -1.98
SEC8YPR055W PSD2P53037 1138 aaKnown RBP2.7□□□□□ -1.98
SEC8YPR055W RGA1P39083 1007 aa2.7□□□□□ -1.98
SEC8YPR055W MRM1P25270 412 aa2.69□□□□□ -1.98
SEC8YPR055W FKH1P40466 484 aa2.69□□□□□ -1.98
SEC8YPR055W WSC3Q12215 556 aa2.68□□□□□ -1.98
SEC8YPR055W RCR1P38212 213 aa2.67□□□□□ -1.98
SEC8YPR055W MGA2P40578 1113 aa2.67□□□□□ -1.98
SEC8YPR055W PIB1Q06651 286 aa2.66□□□□□ -1.98
SEC8YPR055W YOR238WQ08634 303 aa2.65□□□□□ -1.98
SEC8YPR055W TIF11P38912 153 aaKnown RBP2.62□□□□□ -1.99
SEC8YPR055W YFR006WP43590 535 aa2.62□□□□□ -1.99
SEC8YPR055W BCK2P33306 851 aa2.6□□□□□ -1.99
SEC8YPR055W RTG3P38165 486 aa2.59□□□□□ -1.99
SEC8YPR055W VPS29P38759 282 aa2.59□□□□□ -1.99
SEC8YPR055W STS1P38637 319 aa2.59□□□□□ -1.99
SEC8YPR055W DBP1P24784 617 aaKnown RBP2.58□□□□□ -2
SEC8YPR055W GTT3P39996 337 aa2.58□□□□□ -2
SEC8YPR055W YAP5P40574 245 aa2.58□□□□□ -2
SEC8YPR055W RAM2P29703 316 aa2.58□□□□□ -2
SEC8YPR055W LDB19Q12502 818 aa2.56□□□□□ -2
SEC8YPR055W YMR1P47147 688 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SEC8YPR055W DMA1P38823 416 aa2.55□□□□□ -2
SEC8YPR055W MST1P07236 462 aa2.54□□□□□ -2
SEC8YPR055W MIF2P35201 549 aa2.54□□□□□ -2
SEC8YPR055W NSR1P27476 414 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SEC8YPR055W ULI1P43604 169 aa2.53□□□□□ -2
SEC8YPR055W SET4P42948 560 aa2.53□□□□□ -2.01
SEC8YPR055W VMA1P17255 1071 aaKnown RBP2.52□□□□□ -2.01
SEC8YPR055W EDS1P38073 919 aa2.51□□□□□ -2.01
SEC8YPR055W TFG1P41895 735 aaPredicted RBP2.51□□□□□ -2.01
SEC8YPR055W MAK11P20484 414 aaKnown RBP2.5□□□□□ -2.01
SEC8YPR055W COQ8P27697 501 aa2.5□□□□□ -2.01
SEC8YPR055W YOL036WQ08206 761 aa2.49□□□□□ -2.01
SEC8YPR055W DCW1P36091 449 aa2.48□□□□□ -2.01
SEC8YPR055W SET1P38827 1080 aaKnown RBP2.48□□□□□ -2.01
SEC8YPR055W DPS1P04802 557 aaKnown RBP2.47□□□□□ -2.01
SEC8YPR055W PTC3P34221 468 aaKnown RBP2.47□□□□□ -2.01
SEC8YPR055W GYP5Q12344 894 aa2.47□□□□□ -2.01
SEC8YPR055W NCR1Q12200 1170 aa2.46□□□□□ -2.02
SEC8YPR055W TRP5P00931 707 aaKnown RBP2.45□□□□□ -2.02
SEC8YPR055W SAM3Q08986 587 aa2.45□□□□□ -2.02
SEC8YPR055W GRE2Q12068 342 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms