RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C MTC1P47018 478 aaKnown RBP6.92□□□□□ -1.3
NIP100YPL174C DRS1P32892 752 aaKnown RBP6.76□□□□□ -1.33
NIP100YPL174C FAP1P53971 965 aa6.21□□□□□ -1.42
NIP100YPL174C DIP2Q12220 943 aaPredicted RBP5.8□□□□□ -1.48
NIP100YPL174C ISW2Q08773 1120 aa5.78□□□□□ -1.48
NIP100YPL174C PRY3P47033 881 aa5.78□□□□□ -1.48
NIP100YPL174C BFR2Q06631 534 aaKnown RBP5.75□□□□□ -1.49
NIP100YPL174C AAD16Q02895 342 aa5.71□□□□□ -1.5
NIP100YPL174C RPG1P38249 964 aaKnown RBP5.68□□□□□ -1.5
NIP100YPL174C PRI1P10363 409 aa5.68□□□□□ -1.5
NIP100YPL174C RSE1Q04693 1361 aaKnown RBP5.6□□□□□ -1.51
NIP100YPL174C AVT3P36062 692 aa5.52□□□□□ -1.53
NIP100YPL174C TSR3Q12094 313 aaKnown RBP5.48□□□□□ -1.53
NIP100YPL174C REB1P21538 810 aa5.44□□□□□ -1.54
NIP100YPL174C RPL17AP05740 184 aaKnown RBP5.43□□□□□ -1.54
NIP100YPL174C RPL17BP46990 184 aaKnown RBP5.43□□□□□ -1.54
NIP100YPL174C HAA1Q12753 694 aaKnown RBP5.37□□□□□ -1.55
NIP100YPL174C MRPL32P25348 183 aa5.32□□□□□ -1.56
NIP100YPL174C YCK3P39962 524 aa5.15□□□□□ -1.58
NIP100YPL174C TFA1P36100 482 aa5.05□□□□□ -1.6
NIP100YPL174C SPT21P35209 758 aa5.02□□□□□ -1.61
NIP100YPL174C YGL015CP33199 130 aa4.99□□□□□ -1.61
NIP100YPL174C HOP09932 586 aa4.96□□□□□ -1.62
NIP100YPL174C CDC27P38042 758 aa4.94□□□□□ -1.62
NIP100YPL174C YKR023WP36119 530 aaKnown RBP4.94□□□□□ -1.62
NIP100YPL174C DCD1P06773 312 aa4.91□□□□□ -1.62
NIP100YPL174C RIM101P33400 625 aa4.91□□□□□ -1.62
NIP100YPL174C YIL055CP40523 627 aaKnown RBP4.89□□□□□ -1.63
NIP100YPL174C TFC8Q12308 588 aa4.88□□□□□ -1.63
NIP100YPL174C PTP3P40048 928 aa4.87□□□□□ -1.63
NIP100YPL174C YAH1Q12184 172 aaKnown RBP4.84□□□□□ -1.63
NIP100YPL174C MAP2P38174 421 aaKnown RBP4.82□□□□□ -1.64
NIP100YPL174C UBP10P53874 792 aaPredicted RBP4.81□□□□□ -1.64
NIP100YPL174C SCY1P53009 804 aa4.81□□□□□ -1.64
NIP100YPL174C OXP1P28273 1286 aa4.75□□□□□ -1.65
NIP100YPL174C SLX5P32828 619 aaKnown RBP4.74□□□□□ -1.65
NIP100YPL174C BCH2P36122 765 aa4.73□□□□□ -1.65
NIP100YPL174C TIF4632P39936 914 aaKnown RBP4.71□□□□□ -1.66
NIP100YPL174C BBC1P47068 1157 aa4.71□□□□□ -1.66
NIP100YPL174C RSM7P47150 247 aa4.71□□□□□ -1.66
NIP100YPL174C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
NIP100YPL174C SSP1P38871 571 aa4.66□□□□□ -1.66
NIP100YPL174C EPS1P40557 701 aa4.66□□□□□ -1.66
NIP100YPL174C AI2P03876 854 aa4.64□□□□□ -1.67
NIP100YPL174C BDF1P35817 686 aa4.61□□□□□ -1.67
NIP100YPL174C YLR271WQ06152 274 aa4.59□□□□□ -1.67
NIP100YPL174C TGL3P40308 642 aa4.57□□□□□ -1.68
NIP100YPL174C MRM1P25270 412 aa4.52□□□□□ -1.69
NIP100YPL174C UBP9P39967 754 aa4.51□□□□□ -1.69
NIP100YPL174C MGA2P40578 1113 aa4.5□□□□□ -1.69
NIP100YPL174C GTT3P39996 337 aa4.49□□□□□ -1.69
NIP100YPL174C YOR238WQ08634 303 aa4.48□□□□□ -1.69
NIP100YPL174C PSD2P53037 1138 aaKnown RBP4.47□□□□□ -1.69
NIP100YPL174C YAP5P40574 245 aa4.46□□□□□ -1.7
NIP100YPL174C CST9Q06032 482 aa4.45□□□□□ -1.7
NIP100YPL174C PIB1Q06651 286 aa4.44□□□□□ -1.7
NIP100YPL174C WSC3Q12215 556 aa4.42□□□□□ -1.7
NIP100YPL174C RTG3P38165 486 aa4.41□□□□□ -1.7
NIP100YPL174C BUD31P25337 157 aaPredicted RBP4.41□□□□□ -1.7
NIP100YPL174C SIS1P25294 352 aaKnown RBP4.39□□□□□ -1.71
NIP100YPL174C YFR006WP43590 535 aa4.37□□□□□ -1.71
NIP100YPL174C YMR1P47147 688 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
NIP100YPL174C YBL029C-AQ3E756 94 aa4.35□□□□□ -1.71
NIP100YPL174C DBP1P24784 617 aaKnown RBP4.35□□□□□ -1.71
NIP100YPL174C NSR1P27476 414 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
NIP100YPL174C SPP1Q03012 353 aa4.33□□□□□ -1.72
NIP100YPL174C RCR1P38212 213 aa4.31□□□□□ -1.72
NIP100YPL174C MIF2P35201 549 aa4.3□□□□□ -1.72
NIP100YPL174C MST1P07236 462 aa4.29□□□□□ -1.72
NIP100YPL174C VPS29P38759 282 aa4.29□□□□□ -1.72
NIP100YPL174C SET4P42948 560 aa4.28□□□□□ -1.72
NIP100YPL174C VNX1P42839 908 aa4.27□□□□□ -1.73
NIP100YPL174C STS1P38637 319 aa4.26□□□□□ -1.73
NIP100YPL174C TIF11P38912 153 aaKnown RBP4.26□□□□□ -1.73
NIP100YPL174C VMA1P17255 1071 aaKnown RBP4.25□□□□□ -1.73
NIP100YPL174C ULI1P43604 169 aa4.25□□□□□ -1.73
NIP100YPL174C YOL036WQ08206 761 aa4.25□□□□□ -1.73
NIP100YPL174C EAP1P36041 632 aaKnown RBP4.24□□□□□ -1.73
NIP100YPL174C GYP5Q12344 894 aa4.24□□□□□ -1.73
NIP100YPL174C RAM2P29703 316 aa4.23□□□□□ -1.73
NIP100YPL174C MSB4Q12317 492 aa4.23□□□□□ -1.73
NIP100YPL174C MAK11P20484 414 aaKnown RBP4.22□□□□□ -1.73
NIP100YPL174C DCW1P36091 449 aa4.22□□□□□ -1.73
NIP100YPL174C YJL171CP46992 396 aa4.22□□□□□ -1.73
NIP100YPL174C ATH1P48016 1211 aa4.22□□□□□ -1.73
NIP100YPL174C TFG1P41895 735 aaPredicted RBP4.21□□□□□ -1.74
NIP100YPL174C GRE2Q12068 342 aaKnown RBP4.2□□□□□ -1.74
NIP100YPL174C RQC2Q12532 1038 aaKnown RBP4.2□□□□□ -1.74
NIP100YPL174C LDB19Q12502 818 aa4.19□□□□□ -1.74
NIP100YPL174C HTA1P04911 132 aaKnown RBP4.19□□□□□ -1.74
NIP100YPL174C HTA2P04912 132 aa4.19□□□□□ -1.74
NIP100YPL174C COQ8P27697 501 aa4.19□□□□□ -1.74
NIP100YPL174C ABP1P15891 592 aaKnown RBP4.18□□□□□ -1.74
NIP100YPL174C TRP5P00931 707 aaKnown RBP4.17□□□□□ -1.74
NIP100YPL174C RTG1P32607 177 aa4.16□□□□□ -1.74
NIP100YPL174C SAM3Q08986 587 aa4.16□□□□□ -1.74
NIP100YPL174C PTC3P34221 468 aaKnown RBP4.15□□□□□ -1.75
NIP100YPL174C DMA1P38823 416 aa4.13□□□□□ -1.75
NIP100YPL174C SET1P38827 1080 aaKnown RBP4.13□□□□□ -1.75
NIP100YPL174C YNL035CP53962 389 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms