RNA–Protein interactions for RNA: YPL063W

TIM50, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM50, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM50YPL063W SGS1P35187 1447 aa14.26□□□□□ -0.13
TIM50YPL063W INO80P53115 1489 aa14.15□□□□□ -0.14
TIM50YPL063W MON2P48563 1636 aaPredicted RBP14.12□□□□□ -0.15
TIM50YPL063W TCB3Q03640 1545 aaKnown RBP14.02□□□□□ -0.17
TIM50YPL063W TY1B-DR4Q07793 1604 aa13.88□□□□□ -0.19
TIM50YPL063W SWR1Q05471 1514 aa13.73□□□□□ -0.21
TIM50YPL063W HSL1P34244 1518 aa13.56□□□□□ -0.24
TIM50YPL063W SPT6P23615 1451 aaKnown RBP13.55□□□□□ -0.24
TIM50YPL063W SPA2P23201 1466 aaKnown RBP13.5□□□□□ -0.25
TIM50YPL063W DNA2P38859 1522 aa13.48□□□□□ -0.25
TIM50YPL063W SSN2P38931 1420 aa13.46□□□□□ -0.26
TIM50YPL063W KOG1P38873 1557 aa13.39□□□□□ -0.27
TIM50YPL063W HIR3P47171 1648 aa13.31□□□□□ -0.28
TIM50YPL063W XRN1P22147 1528 aaKnown RBP13.19□□□□□ -0.3
TIM50YPL063W DRS1P32892 752 aaKnown RBP13.09□□□□□ -0.31
TIM50YPL063W ECM5Q03214 1411 aa12.99□□□□□ -0.33
TIM50YPL063W BUD4P47136 1447 aa12.98□□□□□ -0.33
TIM50YPL063W THO2P53552 1597 aaKnown RBP12.97□□□□□ -0.33
TIM50YPL063W REV3P14284 1504 aa12.97□□□□□ -0.33
TIM50YPL063W TAF2P23255 1407 aa12.87□□□□□ -0.35
TIM50YPL063W SIN3P22579 1536 aa12.83□□□□□ -0.36
TIM50YPL063W MDS3P53094 1487 aa12.78□□□□□ -0.36
TIM50YPL063W SSK2P53599 1579 aa12.76□□□□□ -0.37
TIM50YPL063W ATG2P53855 1592 aa12.76□□□□□ -0.37
TIM50YPL063W SKI3P17883 1432 aaKnown RBP12.72□□□□□ -0.37
TIM50YPL063W PEP1P32319 1579 aa12.69□□□□□ -0.38
TIM50YPL063W ESP1Q03018 1630 aa12.68□□□□□ -0.38
TIM50YPL063W RSE1Q04693 1361 aaKnown RBP12.68□□□□□ -0.38
TIM50YPL063W MYO2P19524 1574 aaKnown RBP12.6□□□□□ -0.39
TIM50YPL063W YPK9Q12697 1472 aa12.48□□□□□ -0.41
TIM50YPL063W SCC2Q04002 1493 aa12.42□□□□□ -0.42
TIM50YPL063W MTC1P47018 478 aaKnown RBP12.42□□□□□ -0.42
TIM50YPL063W BPT1P14772 1559 aa12.41□□□□□ -0.42
TIM50YPL063W UFD4P33202 1483 aa12.41□□□□□ -0.42
TIM50YPL063W RPO31P04051 1460 aa12.33□□□□□ -0.44
TIM50YPL063W POL1P13382 1468 aa12.32□□□□□ -0.44
TIM50YPL063W STU1P38198 1513 aa12.28□□□□□ -0.44
TIM50YPL063W RKR1Q04781 1562 aa12.28□□□□□ -0.44
TIM50YPL063W YCF1P39109 1515 aaKnown RBP12.25□□□□□ -0.45
TIM50YPL063W TY2B-LR1P0C2J3 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-FP0CX63 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-GR2P0CX64 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-CP25384 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-DR2Q03494 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY1B-DR1Q03855 1755 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-DR3Q07791 1770 aaKnown RBP12.23□□□□□ -0.45
TIM50YPL063W TY2B-OR1Q12113 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-DR1Q12472 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TY2B-OR2Q12501 1770 aa12.23□□□□□ -0.45
TIM50YPL063W TOP2P06786 1428 aaKnown RBP12.22□□□□□ -0.45
TIM50YPL063W RQC2Q12532 1038 aaKnown RBP12.21□□□□□ -0.45
TIM50YPL063W YOR1P53049 1477 aa12.17□□□□□ -0.46
TIM50YPL063W SMC4Q12267 1418 aa12.12□□□□□ -0.47
TIM50YPL063W TY1B-DR3Q99231 1755 aa12.11□□□□□ -0.47
TIM50YPL063W CDC25P04821 1589 aa12.11□□□□□ -0.47
TIM50YPL063W CHD1P32657 1468 aa12.1□□□□□ -0.47
TIM50YPL063W TY2B-BQ12491 1770 aa12.1□□□□□ -0.47
TIM50YPL063W YTA7P40340 1379 aa12.1□□□□□ -0.47
TIM50YPL063W TY1B-BRQ12193 1756 aa12.09□□□□□ -0.47
TIM50YPL063W TY1B-GR3Q12316 1755 aa12.09□□□□□ -0.47
TIM50YPL063W TY1B-ORQ92393 1755 aa12.09□□□□□ -0.47
TIM50YPL063W MMS22Q06164 1454 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-HO13535 1793 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-DR5P0C2I2 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-DR6P0C2I3 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-LR2P0C2I5 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-LR3P0C2I6 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W TY1B-PR1P0C2I9 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W TY1B-PR2P0C2J0 1756 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-PR3P0C2J1 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W TY1B-JR1P47098 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-ML2Q03434 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W TY1B-ER1Q03612 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-ML1Q04711 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W TY1B-GR2Q12269 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-OLQ12273 1755 aa12.04□□□□□ -0.48
TIM50YPL063W TY1B-PLQ12414 1755 aaKnown RBP12.04□□□□□ -0.48
TIM50YPL063W ESC1Q03661 1658 aaKnown RBP12.03□□□□□ -0.48
TIM50YPL063W PAN1P32521 1480 aa12.02□□□□□ -0.49
TIM50YPL063W MYO4P32492 1471 aa12□□□□□ -0.49
TIM50YPL063W SPP41P38904 1435 aa11.98□□□□□ -0.49
TIM50YPL063W SAS10Q12136 610 aaPredicted RBP11.94□□□□□ -0.5
TIM50YPL063W DNF1P32660 1571 aa11.94□□□□□ -0.5
TIM50YPL063W TRM732Q03496 1420 aa11.9□□□□□ -0.5
TIM50YPL063W RPA190P10964 1664 aaKnown RBP11.9□□□□□ -0.5
TIM50YPL063W TSC11P40061 1430 aa11.89□□□□□ -0.51
TIM50YPL063W VTH1P40438 1549 aa11.89□□□□□ -0.51
TIM50YPL063W VTH2P40890 1549 aa11.89□□□□□ -0.51
TIM50YPL063W SNQ2P32568 1501 aaKnown RBP11.84□□□□□ -0.51
TIM50YPL063W STH1P32597 1359 aa11.84□□□□□ -0.51
TIM50YPL063W TY1B-JR2P47100 1755 aaKnown RBP11.83□□□□□ -0.52
TIM50YPL063W TY1B-ER2Q03619 1755 aa11.83□□□□□ -0.52
TIM50YPL063W TY1B-MR1Q04214 1755 aa11.83□□□□□ -0.52
TIM50YPL063W TY1B-MR2Q04670 1755 aaKnown RBP11.83□□□□□ -0.52
TIM50YPL063W TY1B-LR1Q12088 1755 aaKnown RBP11.83□□□□□ -0.52
TIM50YPL063W TY1B-NL1Q12112 1755 aa11.83□□□□□ -0.52
TIM50YPL063W TY1B-GR1Q12141 1755 aa11.83□□□□□ -0.52
TIM50YPL063W TY1B-BLQ12490 1755 aa11.83□□□□□ -0.52
TIM50YPL063W MLP2P40457 1679 aa11.78□□□□□ -0.52
TIM50YPL063W MET5P47169 1442 aa11.78□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms