RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C MON2P48563 1636 aaPredicted RBP11□□□□□ -0.65
UBC11YOR339C SGS1P35187 1447 aa10.96□□□□□ -0.65
UBC11YOR339C INO80P53115 1489 aa10.95□□□□□ -0.66
UBC11YOR339C TCB3Q03640 1545 aaKnown RBP10.82□□□□□ -0.68
UBC11YOR339C TY1B-DR4Q07793 1604 aa10.78□□□□□ -0.68
UBC11YOR339C SWR1Q05471 1514 aa10.65□□□□□ -0.7
UBC11YOR339C HSL1P34244 1518 aa10.48□□□□□ -0.73
UBC11YOR339C DNA2P38859 1522 aa10.47□□□□□ -0.73
UBC11YOR339C SPT6P23615 1451 aaKnown RBP10.45□□□□□ -0.74
UBC11YOR339C KOG1P38873 1557 aa10.38□□□□□ -0.75
UBC11YOR339C SPA2P23201 1466 aaKnown RBP10.36□□□□□ -0.75
UBC11YOR339C SSN2P38931 1420 aa10.32□□□□□ -0.76
UBC11YOR339C HIR3P47171 1648 aa10.29□□□□□ -0.76
UBC11YOR339C XRN1P22147 1528 aaKnown RBP10.15□□□□□ -0.78
UBC11YOR339C MTC1P47018 478 aaKnown RBP10.12□□□□□ -0.79
UBC11YOR339C THO2P53552 1597 aaKnown RBP10.04□□□□□ -0.8
UBC11YOR339C ECM5Q03214 1411 aa10.02□□□□□ -0.81
UBC11YOR339C BUD4P47136 1447 aa10□□□□□ -0.81
UBC11YOR339C REV3P14284 1504 aa10□□□□□ -0.81
UBC11YOR339C DRS1P32892 752 aaKnown RBP9.98□□□□□ -0.81
UBC11YOR339C SIN3P22579 1536 aa9.91□□□□□ -0.82
UBC11YOR339C ATG2P53855 1592 aa9.89□□□□□ -0.83
UBC11YOR339C MDS3P53094 1487 aa9.87□□□□□ -0.83
UBC11YOR339C TAF2P23255 1407 aa9.87□□□□□ -0.83
UBC11YOR339C PEP1P32319 1579 aa9.85□□□□□ -0.83
UBC11YOR339C SSK2P53599 1579 aa9.84□□□□□ -0.83
UBC11YOR339C RSE1Q04693 1361 aaKnown RBP9.81□□□□□ -0.84
UBC11YOR339C ESP1Q03018 1630 aa9.8□□□□□ -0.84
UBC11YOR339C SKI3P17883 1432 aaKnown RBP9.76□□□□□ -0.85
UBC11YOR339C MYO2P19524 1574 aaKnown RBP9.69□□□□□ -0.86
UBC11YOR339C YPK9Q12697 1472 aa9.62□□□□□ -0.87
UBC11YOR339C BPT1P14772 1559 aa9.6□□□□□ -0.87
UBC11YOR339C SCC2Q04002 1493 aa9.59□□□□□ -0.87
UBC11YOR339C UFD4P33202 1483 aa9.55□□□□□ -0.88
UBC11YOR339C RPO31P04051 1460 aa9.52□□□□□ -0.89
UBC11YOR339C TY2B-LR1P0C2J3 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-FP0CX63 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-GR2P0CX64 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-CP25384 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-DR2Q03494 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY1B-DR1Q03855 1755 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-DR3Q07791 1770 aaKnown RBP9.5□□□□□ -0.89
UBC11YOR339C TY2B-OR1Q12113 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-DR1Q12472 1770 aa9.5□□□□□ -0.89
UBC11YOR339C TY2B-OR2Q12501 1770 aa9.5□□□□□ -0.89
UBC11YOR339C POL1P13382 1468 aa9.47□□□□□ -0.89
UBC11YOR339C YCF1P39109 1515 aaKnown RBP9.46□□□□□ -0.9
UBC11YOR339C RKR1Q04781 1562 aa9.46□□□□□ -0.9
UBC11YOR339C STU1P38198 1513 aa9.42□□□□□ -0.9
UBC11YOR339C TY1B-DR3Q99231 1755 aa9.42□□□□□ -0.9
UBC11YOR339C TOP2P06786 1428 aaKnown RBP9.4□□□□□ -0.9
UBC11YOR339C TY1B-BRQ12193 1756 aa9.4□□□□□ -0.9
UBC11YOR339C TY1B-GR3Q12316 1755 aa9.4□□□□□ -0.9
UBC11YOR339C TY1B-ORQ92393 1755 aa9.4□□□□□ -0.9
UBC11YOR339C TY2B-BQ12491 1770 aa9.4□□□□□ -0.91
UBC11YOR339C YOR1P53049 1477 aa9.36□□□□□ -0.91
UBC11YOR339C CDC25P04821 1589 aa9.36□□□□□ -0.91
UBC11YOR339C TY1B-HO13535 1793 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-DR5P0C2I2 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-DR6P0C2I3 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-LR2P0C2I5 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-LR3P0C2I6 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C TY1B-PR1P0C2I9 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C TY1B-PR2P0C2J0 1756 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-PR3P0C2J1 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C TY1B-JR1P47098 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-ML2Q03434 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C TY1B-ER1Q03612 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-ML1Q04711 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C TY1B-GR2Q12269 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-OLQ12273 1755 aa9.35□□□□□ -0.91
UBC11YOR339C TY1B-PLQ12414 1755 aaKnown RBP9.35□□□□□ -0.91
UBC11YOR339C CHD1P32657 1468 aa9.33□□□□□ -0.92
UBC11YOR339C RQC2Q12532 1038 aaKnown RBP9.32□□□□□ -0.92
UBC11YOR339C ESC1Q03661 1658 aaKnown RBP9.32□□□□□ -0.92
UBC11YOR339C SMC4Q12267 1418 aa9.31□□□□□ -0.92
UBC11YOR339C PAN1P32521 1480 aa9.28□□□□□ -0.92
UBC11YOR339C MMS22Q06164 1454 aa9.27□□□□□ -0.93
UBC11YOR339C DNF1P32660 1571 aa9.25□□□□□ -0.93
UBC11YOR339C YTA7P40340 1379 aa9.24□□□□□ -0.93
UBC11YOR339C RPA190P10964 1664 aaKnown RBP9.23□□□□□ -0.93
UBC11YOR339C SPP41P38904 1435 aa9.21□□□□□ -0.94
UBC11YOR339C MYO4P32492 1471 aa9.21□□□□□ -0.94
UBC11YOR339C TY1B-JR2P47100 1755 aaKnown RBP9.19□□□□□ -0.94
UBC11YOR339C TY1B-ER2Q03619 1755 aa9.19□□□□□ -0.94
UBC11YOR339C TY1B-MR1Q04214 1755 aa9.19□□□□□ -0.94
UBC11YOR339C TY1B-MR2Q04670 1755 aaKnown RBP9.19□□□□□ -0.94
UBC11YOR339C TY1B-LR1Q12088 1755 aaKnown RBP9.19□□□□□ -0.94
UBC11YOR339C TY1B-NL1Q12112 1755 aa9.19□□□□□ -0.94
UBC11YOR339C TY1B-GR1Q12141 1755 aa9.19□□□□□ -0.94
UBC11YOR339C TY1B-BLQ12490 1755 aa9.19□□□□□ -0.94
UBC11YOR339C VTH1P40438 1549 aa9.15□□□□□ -0.95
UBC11YOR339C VTH2P40890 1549 aa9.15□□□□□ -0.95
UBC11YOR339C TSC11P40061 1430 aa9.14□□□□□ -0.95
UBC11YOR339C TRM732Q03496 1420 aa9.14□□□□□ -0.95
UBC11YOR339C NTE1Q04958 1679 aa9.11□□□□□ -0.95
UBC11YOR339C MET5P47169 1442 aa9.1□□□□□ -0.95
UBC11YOR339C SNQ2P32568 1501 aaKnown RBP9.09□□□□□ -0.95
UBC11YOR339C RPO21P04050 1733 aaKnown RBP9.08□□□□□ -0.96
UBC11YOR339C MLP2P40457 1679 aa9.07□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms