RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeastyeast

Gene UTP23, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP23YOR004W MTC1P47018 478 aaKnown RBP13.36□□□□□ -0.27
UTP23YOR004W DRS1P32892 752 aaKnown RBP12.7□□□□□ -0.38
UTP23YOR004W FAP1P53971 965 aa11.78□□□□□ -0.52
UTP23YOR004W PRI1P10363 409 aa11.13□□□□□ -0.63
UTP23YOR004W DIP2Q12220 943 aaPredicted RBP11.06□□□□□ -0.64
UTP23YOR004W AAD16Q02895 342 aa11.05□□□□□ -0.64
UTP23YOR004W PRY3P47033 881 aa11.04□□□□□ -0.64
UTP23YOR004W ISW2Q08773 1120 aa11.04□□□□□ -0.64
UTP23YOR004W RPG1P38249 964 aaKnown RBP10.9□□□□□ -0.66
UTP23YOR004W AVT3P36062 692 aa10.7□□□□□ -0.7
UTP23YOR004W BFR2Q06631 534 aaKnown RBP10.67□□□□□ -0.7
UTP23YOR004W RSE1Q04693 1361 aaKnown RBP10.63□□□□□ -0.71
UTP23YOR004W TSR3Q12094 313 aaKnown RBP10.52□□□□□ -0.73
UTP23YOR004W HAA1Q12753 694 aaKnown RBP10.4□□□□□ -0.74
UTP23YOR004W YCK3P39962 524 aa10.39□□□□□ -0.75
UTP23YOR004W RPL17AP05740 184 aaKnown RBP10.27□□□□□ -0.77
UTP23YOR004W RPL17BP46990 184 aaKnown RBP10.27□□□□□ -0.77
UTP23YOR004W REB1P21538 810 aa10.22□□□□□ -0.77
UTP23YOR004W MRPL32P25348 183 aa10.14□□□□□ -0.79
UTP23YOR004W SPT21P35209 758 aa9.82□□□□□ -0.84
UTP23YOR004W YGL015CP33199 130 aa9.67□□□□□ -0.86
UTP23YOR004W YKR023WP36119 530 aaKnown RBP9.66□□□□□ -0.86
UTP23YOR004W CDC27P38042 758 aa9.64□□□□□ -0.87
UTP23YOR004W RIM101P33400 625 aa9.54□□□□□ -0.88
UTP23YOR004W TFA1P36100 482 aa9.54□□□□□ -0.88
UTP23YOR004W TFC8Q12308 588 aa9.49□□□□□ -0.89
UTP23YOR004W HOP09932 586 aa9.47□□□□□ -0.89
UTP23YOR004W DCD1P06773 312 aa9.41□□□□□ -0.9
UTP23YOR004W UBP10P53874 792 aaPredicted RBP9.36□□□□□ -0.91
UTP23YOR004W MAP2P38174 421 aaKnown RBP9.32□□□□□ -0.92
UTP23YOR004W OXP1P28273 1286 aa9.22□□□□□ -0.93
UTP23YOR004W BCH2P36122 765 aa9.18□□□□□ -0.94
UTP23YOR004W SCY1P53009 804 aa9.18□□□□□ -0.94
UTP23YOR004W YIL055CP40523 627 aaKnown RBP9.13□□□□□ -0.95
UTP23YOR004W PTP3P40048 928 aa9.09□□□□□ -0.95
UTP23YOR004W SLX5P32828 619 aaKnown RBP9.07□□□□□ -0.96
UTP23YOR004W TIF4632P39936 914 aaKnown RBP9□□□□□ -0.97
UTP23YOR004W YAH1Q12184 172 aaKnown RBP8.99□□□□□ -0.97
UTP23YOR004W EPS1P40557 701 aa8.97□□□□□ -0.97
UTP23YOR004W RSM7P47150 247 aa8.97□□□□□ -0.97
UTP23YOR004W TGL3P40308 642 aa8.94□□□□□ -0.98
UTP23YOR004W BDF1P35817 686 aa8.92□□□□□ -0.98
UTP23YOR004W BBC1P47068 1157 aa8.89□□□□□ -0.99
UTP23YOR004W AI2P03876 854 aa8.86□□□□□ -0.99
UTP23YOR004W YLR271WQ06152 274 aa8.85□□□□□ -0.99
UTP23YOR004W SSP1P38871 571 aa8.82□□□□□ -1
UTP23YOR004W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
UTP23YOR004W BUD31P25337 157 aaPredicted RBP8.74□□□□□ -1.01
UTP23YOR004W PSD2P53037 1138 aaKnown RBP8.69□□□□□ -1.02
UTP23YOR004W NSR1P27476 414 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
UTP23YOR004W UBP9P39967 754 aa8.62□□□□□ -1.03
UTP23YOR004W YOR238WQ08634 303 aa8.59□□□□□ -1.03
UTP23YOR004W MST1P07236 462 aa8.58□□□□□ -1.04
UTP23YOR004W MGA2P40578 1113 aa8.58□□□□□ -1.04
UTP23YOR004W MRM1P25270 412 aa8.56□□□□□ -1.04
UTP23YOR004W YAP5P40574 245 aa8.56□□□□□ -1.04
UTP23YOR004W CST9Q06032 482 aa8.54□□□□□ -1.04
UTP23YOR004W RTG3P38165 486 aa8.41□□□□□ -1.06
UTP23YOR004W YBL029C-AQ3E756 94 aa8.4□□□□□ -1.06
UTP23YOR004W GTT3P39996 337 aa8.37□□□□□ -1.07
UTP23YOR004W SIS1P25294 352 aaKnown RBP8.36□□□□□ -1.07
UTP23YOR004W VPS29P38759 282 aa8.36□□□□□ -1.07
UTP23YOR004W PIB1Q06651 286 aa8.36□□□□□ -1.07
UTP23YOR004W YMR1P47147 688 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
UTP23YOR004W VNX1P42839 908 aa8.33□□□□□ -1.08
UTP23YOR004W WSC3Q12215 556 aa8.32□□□□□ -1.08
UTP23YOR004W DBP1P24784 617 aaKnown RBP8.3□□□□□ -1.08
UTP23YOR004W RCR1P38212 213 aa8.3□□□□□ -1.08
UTP23YOR004W SPP1Q03012 353 aa8.27□□□□□ -1.09
UTP23YOR004W STS1P38637 319 aa8.26□□□□□ -1.09
UTP23YOR004W YFR006WP43590 535 aa8.26□□□□□ -1.09
UTP23YOR004W TIF11P38912 153 aaKnown RBP8.21□□□□□ -1.1
UTP23YOR004W VMA1P17255 1071 aaKnown RBP8.19□□□□□ -1.1
UTP23YOR004W MSB4Q12317 492 aa8.18□□□□□ -1.1
UTP23YOR004W SET4P42948 560 aa8.14□□□□□ -1.11
UTP23YOR004W ULI1P43604 169 aa8.14□□□□□ -1.11
UTP23YOR004W YOL036WQ08206 761 aa8.14□□□□□ -1.11
UTP23YOR004W SAM3Q08986 587 aa8.14□□□□□ -1.11
UTP23YOR004W RAM2P29703 316 aa8.13□□□□□ -1.11
UTP23YOR004W EAP1P36041 632 aaKnown RBP8.13□□□□□ -1.11
UTP23YOR004W MAK11P20484 414 aaKnown RBP8.1□□□□□ -1.11
UTP23YOR004W IOC2Q12072 812 aa8.09□□□□□ -1.11
UTP23YOR004W LDB19Q12502 818 aa8.08□□□□□ -1.12
UTP23YOR004W TRP5P00931 707 aaKnown RBP8.05□□□□□ -1.12
UTP23YOR004W FKH1P40466 484 aa8.05□□□□□ -1.12
UTP23YOR004W GYP5Q12344 894 aa8.05□□□□□ -1.12
UTP23YOR004W ABP1P15891 592 aaKnown RBP8.03□□□□□ -1.12
UTP23YOR004W MIF2P35201 549 aa8.03□□□□□ -1.12
UTP23YOR004W AIR2Q12476 344 aaKnown RBP8.03□□□□□ -1.12
UTP23YOR004W COQ8P27697 501 aa7.98□□□□□ -1.13
UTP23YOR004W RTG1P32607 177 aa7.97□□□□□ -1.13
UTP23YOR004W DCW1P36091 449 aa7.97□□□□□ -1.13
UTP23YOR004W EDS1P38073 919 aa7.97□□□□□ -1.13
UTP23YOR004W YJL171CP46992 396 aa7.97□□□□□ -1.13
UTP23YOR004W GRE2Q12068 342 aaKnown RBP7.97□□□□□ -1.13
UTP23YOR004W HTA1P04911 132 aaKnown RBP7.96□□□□□ -1.14
UTP23YOR004W HTA2P04912 132 aa7.96□□□□□ -1.14
UTP23YOR004W PTC3P34221 468 aaKnown RBP7.96□□□□□ -1.14
UTP23YOR004W YNL035CP53962 389 aaKnown RBP7.96□□□□□ -1.14
UTP23YOR004W SEC61P32915 480 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms