RNA–Protein interactions for RNA: YOL052C

SPE2, Transcript of S-adenosylmethionine decarboxylase, yeastyeast

Gene SPE2, Length 1,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE2YOL052C MON2P48563 1636 aaPredicted RBP16.63■□□□□ 0.25
SPE2YOL052C INO80P53115 1489 aa16.43■□□□□ 0.22
SPE2YOL052C SGS1P35187 1447 aa16.3■□□□□ 0.2
SPE2YOL052C TCB3Q03640 1545 aaKnown RBP16.25■□□□□ 0.19
SPE2YOL052C TY1B-DR4Q07793 1604 aa16.17■□□□□ 0.18
SPE2YOL052C SWR1Q05471 1514 aa16■□□□□ 0.15
SPE2YOL052C DNA2P38859 1522 aa15.73■□□□□ 0.11
SPE2YOL052C HSL1P34244 1518 aa15.68■□□□□ 0.1
SPE2YOL052C KOG1P38873 1557 aa15.62■□□□□ 0.09
SPE2YOL052C SPT6P23615 1451 aaKnown RBP15.61■□□□□ 0.09
SPE2YOL052C SPA2P23201 1466 aaKnown RBP15.4■□□□□ 0.06
SPE2YOL052C HIR3P47171 1648 aa15.35■□□□□ 0.05
SPE2YOL052C SSN2P38931 1420 aa15.3■□□□□ 0.04
SPE2YOL052C XRN1P22147 1528 aaKnown RBP15.1■□□□□ 0.01
SPE2YOL052C THO2P53552 1597 aaKnown RBP15.08■□□□□ 0
SPE2YOL052C BUD4P47136 1447 aa15.01□□□□□ -0.01
SPE2YOL052C ECM5Q03214 1411 aa15□□□□□ -0.01
SPE2YOL052C REV3P14284 1504 aa14.89□□□□□ -0.03
SPE2YOL052C SIN3P22579 1536 aa14.85□□□□□ -0.03
SPE2YOL052C MDS3P53094 1487 aa14.81□□□□□ -0.04
SPE2YOL052C PEP1P32319 1579 aa14.81□□□□□ -0.04
SPE2YOL052C ATG2P53855 1592 aa14.79□□□□□ -0.04
SPE2YOL052C RSE1Q04693 1361 aaKnown RBP14.73□□□□□ -0.05
SPE2YOL052C SSK2P53599 1579 aa14.69□□□□□ -0.06
SPE2YOL052C DRS1P32892 752 aaKnown RBP14.68□□□□□ -0.06
SPE2YOL052C ESP1Q03018 1630 aa14.58□□□□□ -0.08
SPE2YOL052C TAF2P23255 1407 aa14.54□□□□□ -0.08
SPE2YOL052C SKI3P17883 1432 aaKnown RBP14.46□□□□□ -0.09
SPE2YOL052C MYO2P19524 1574 aaKnown RBP14.43□□□□□ -0.1
SPE2YOL052C YPK9Q12697 1472 aa14.4□□□□□ -0.1
SPE2YOL052C BPT1P14772 1559 aa14.36□□□□□ -0.11
SPE2YOL052C SCC2Q04002 1493 aa14.31□□□□□ -0.12
SPE2YOL052C RPO31P04051 1460 aa14.26□□□□□ -0.13
SPE2YOL052C UFD4P33202 1483 aa14.25□□□□□ -0.13
SPE2YOL052C YCF1P39109 1515 aaKnown RBP14.15□□□□□ -0.14
SPE2YOL052C TY2B-LR1P0C2J3 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-FP0CX63 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-GR2P0CX64 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-CP25384 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-DR2Q03494 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY1B-DR1Q03855 1755 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-DR3Q07791 1770 aaKnown RBP14.13□□□□□ -0.15
SPE2YOL052C TY2B-OR1Q12113 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-DR1Q12472 1770 aa14.13□□□□□ -0.15
SPE2YOL052C TY2B-OR2Q12501 1770 aa14.13□□□□□ -0.15
SPE2YOL052C POL1P13382 1468 aa14.12□□□□□ -0.15
SPE2YOL052C MTC1P47018 478 aaKnown RBP14.07□□□□□ -0.16
SPE2YOL052C TOP2P06786 1428 aaKnown RBP14.07□□□□□ -0.16
SPE2YOL052C RKR1Q04781 1562 aa14.02□□□□□ -0.16
SPE2YOL052C TY1B-BRQ12193 1756 aa14.01□□□□□ -0.17
SPE2YOL052C TY1B-GR3Q12316 1755 aa14.01□□□□□ -0.17
SPE2YOL052C TY1B-ORQ92393 1755 aa14.01□□□□□ -0.17
SPE2YOL052C CDC25P04821 1589 aa14□□□□□ -0.17
SPE2YOL052C TY1B-DR3Q99231 1755 aa13.99□□□□□ -0.17
SPE2YOL052C CHD1P32657 1468 aa13.98□□□□□ -0.17
SPE2YOL052C TY2B-BQ12491 1770 aa13.97□□□□□ -0.17
SPE2YOL052C YOR1P53049 1477 aa13.94□□□□□ -0.18
SPE2YOL052C STU1P38198 1513 aa13.94□□□□□ -0.18
SPE2YOL052C TY1B-HO13535 1793 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-DR5P0C2I2 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-DR6P0C2I3 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-LR2P0C2I5 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-LR3P0C2I6 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C TY1B-PR1P0C2I9 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C TY1B-PR2P0C2J0 1756 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-PR3P0C2J1 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C TY1B-JR1P47098 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-ML2Q03434 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C TY1B-ER1Q03612 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-ML1Q04711 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C TY1B-GR2Q12269 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-OLQ12273 1755 aa13.93□□□□□ -0.18
SPE2YOL052C TY1B-PLQ12414 1755 aaKnown RBP13.93□□□□□ -0.18
SPE2YOL052C SMC4Q12267 1418 aa13.91□□□□□ -0.18
SPE2YOL052C PAN1P32521 1480 aa13.87□□□□□ -0.19
SPE2YOL052C DNF1P32660 1571 aa13.86□□□□□ -0.19
SPE2YOL052C ESC1Q03661 1658 aaKnown RBP13.83□□□□□ -0.2
SPE2YOL052C MMS22Q06164 1454 aa13.81□□□□□ -0.2
SPE2YOL052C RPA190P10964 1664 aaKnown RBP13.79□□□□□ -0.2
SPE2YOL052C MET5P47169 1442 aa13.74□□□□□ -0.21
SPE2YOL052C YTA7P40340 1379 aa13.73□□□□□ -0.21
SPE2YOL052C MYO4P32492 1471 aa13.73□□□□□ -0.21
SPE2YOL052C SPP41P38904 1435 aa13.73□□□□□ -0.21
SPE2YOL052C TY1B-JR2P47100 1755 aaKnown RBP13.67□□□□□ -0.22
SPE2YOL052C TY1B-ER2Q03619 1755 aa13.67□□□□□ -0.22
SPE2YOL052C TY1B-MR1Q04214 1755 aa13.67□□□□□ -0.22
SPE2YOL052C TY1B-MR2Q04670 1755 aaKnown RBP13.67□□□□□ -0.22
SPE2YOL052C TY1B-LR1Q12088 1755 aaKnown RBP13.67□□□□□ -0.22
SPE2YOL052C TY1B-NL1Q12112 1755 aa13.67□□□□□ -0.22
SPE2YOL052C TY1B-GR1Q12141 1755 aa13.67□□□□□ -0.22
SPE2YOL052C TY1B-BLQ12490 1755 aa13.67□□□□□ -0.22
SPE2YOL052C RQC2Q12532 1038 aaKnown RBP13.65□□□□□ -0.22
SPE2YOL052C TSC11P40061 1430 aa13.64□□□□□ -0.23
SPE2YOL052C VTH1P40438 1549 aa13.64□□□□□ -0.23
SPE2YOL052C VTH2P40890 1549 aa13.64□□□□□ -0.23
SPE2YOL052C TRM732Q03496 1420 aa13.62□□□□□ -0.23
SPE2YOL052C NTE1Q04958 1679 aa13.56□□□□□ -0.24
SPE2YOL052C RPO21P04050 1733 aaKnown RBP13.53□□□□□ -0.24
SPE2YOL052C YRF1-1P0CX20 1796 aa13.5□□□□□ -0.25
SPE2YOL052C YRF1-5P0CX21 1796 aa13.5□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms