RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeastyeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT8YOL048C SGS1P35187 1447 aa15.94■□□□□ 0.14
RRT8YOL048C INO80P53115 1489 aa15.66■□□□□ 0.1
RRT8YOL048C TCB3Q03640 1545 aaKnown RBP15.55■□□□□ 0.08
RRT8YOL048C MON2P48563 1636 aaPredicted RBP15.53■□□□□ 0.08
RRT8YOL048C MTC1P47018 478 aaKnown RBP15.34■□□□□ 0.05
RRT8YOL048C TY1B-DR4Q07793 1604 aa15.29■□□□□ 0.04
RRT8YOL048C SWR1Q05471 1514 aa15.17■□□□□ 0.02
RRT8YOL048C SSN2P38931 1420 aa15.06■□□□□ 0
RRT8YOL048C SPT6P23615 1451 aaKnown RBP15.04■□□□□ -0
RRT8YOL048C HSL1P34244 1518 aa15.03■□□□□ -0
RRT8YOL048C SPA2P23201 1466 aaKnown RBP15.02■□□□□ -0
RRT8YOL048C DNA2P38859 1522 aa14.89□□□□□ -0.03
RRT8YOL048C HIR3P47171 1648 aa14.76□□□□□ -0.05
RRT8YOL048C KOG1P38873 1557 aa14.76□□□□□ -0.05
RRT8YOL048C DRS1P32892 752 aaKnown RBP14.73□□□□□ -0.05
RRT8YOL048C XRN1P22147 1528 aaKnown RBP14.67□□□□□ -0.06
RRT8YOL048C ECM5Q03214 1411 aa14.42□□□□□ -0.1
RRT8YOL048C REV3P14284 1504 aa14.41□□□□□ -0.1
RRT8YOL048C BUD4P47136 1447 aa14.4□□□□□ -0.1
RRT8YOL048C TAF2P23255 1407 aa14.38□□□□□ -0.11
RRT8YOL048C THO2P53552 1597 aaKnown RBP14.33□□□□□ -0.12
RRT8YOL048C SIN3P22579 1536 aa14.22□□□□□ -0.13
RRT8YOL048C SKI3P17883 1432 aaKnown RBP14.18□□□□□ -0.14
RRT8YOL048C MDS3P53094 1487 aa14.15□□□□□ -0.14
RRT8YOL048C SSK2P53599 1579 aa14.14□□□□□ -0.15
RRT8YOL048C ATG2P53855 1592 aa14.1□□□□□ -0.15
RRT8YOL048C RSE1Q04693 1361 aaKnown RBP14.03□□□□□ -0.16
RRT8YOL048C ESP1Q03018 1630 aa14.02□□□□□ -0.16
RRT8YOL048C PEP1P32319 1579 aa14.02□□□□□ -0.16
RRT8YOL048C MYO2P19524 1574 aaKnown RBP13.96□□□□□ -0.17
RRT8YOL048C YPK9Q12697 1472 aa13.88□□□□□ -0.19
RRT8YOL048C UFD4P33202 1483 aa13.8□□□□□ -0.2
RRT8YOL048C SCC2Q04002 1493 aa13.79□□□□□ -0.2
RRT8YOL048C BPT1P14772 1559 aa13.73□□□□□ -0.21
RRT8YOL048C POL1P13382 1468 aa13.73□□□□□ -0.21
RRT8YOL048C RPO31P04051 1460 aa13.72□□□□□ -0.21
RRT8YOL048C STU1P38198 1513 aa13.7□□□□□ -0.22
RRT8YOL048C RQC2Q12532 1038 aaKnown RBP13.68□□□□□ -0.22
RRT8YOL048C RKR1Q04781 1562 aa13.64□□□□□ -0.23
RRT8YOL048C TOP2P06786 1428 aaKnown RBP13.62□□□□□ -0.23
RRT8YOL048C YCF1P39109 1515 aaKnown RBP13.59□□□□□ -0.23
RRT8YOL048C YOR1P53049 1477 aa13.57□□□□□ -0.24
RRT8YOL048C YTA7P40340 1379 aa13.56□□□□□ -0.24
RRT8YOL048C SMC4Q12267 1418 aa13.51□□□□□ -0.25
RRT8YOL048C SAS10Q12136 610 aaPredicted RBP13.46□□□□□ -0.25
RRT8YOL048C TY2B-LR1P0C2J3 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-FP0CX63 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-GR2P0CX64 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-CP25384 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-DR2Q03494 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY1B-DR1Q03855 1755 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-DR3Q07791 1770 aaKnown RBP13.45□□□□□ -0.26
RRT8YOL048C TY2B-OR1Q12113 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-DR1Q12472 1770 aa13.45□□□□□ -0.26
RRT8YOL048C TY2B-OR2Q12501 1770 aa13.45□□□□□ -0.26
RRT8YOL048C CHD1P32657 1468 aa13.44□□□□□ -0.26
RRT8YOL048C MMS22Q06164 1454 aa13.4□□□□□ -0.26
RRT8YOL048C CDC25P04821 1589 aa13.39□□□□□ -0.27
RRT8YOL048C MYO4P32492 1471 aa13.38□□□□□ -0.27
RRT8YOL048C SPP41P38904 1435 aa13.36□□□□□ -0.27
RRT8YOL048C PAN1P32521 1480 aa13.36□□□□□ -0.27
RRT8YOL048C TY1B-DR3Q99231 1755 aa13.34□□□□□ -0.27
RRT8YOL048C TY2B-BQ12491 1770 aa13.31□□□□□ -0.28
RRT8YOL048C TY1B-BRQ12193 1756 aa13.29□□□□□ -0.28
RRT8YOL048C TY1B-GR3Q12316 1755 aa13.29□□□□□ -0.28
RRT8YOL048C TY1B-ORQ92393 1755 aa13.29□□□□□ -0.28
RRT8YOL048C STH1P32597 1359 aa13.27□□□□□ -0.29
RRT8YOL048C TRM732Q03496 1420 aa13.26□□□□□ -0.29
RRT8YOL048C TSC11P40061 1430 aa13.25□□□□□ -0.29
RRT8YOL048C TAF7Q05021 590 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-HO13535 1793 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-DR5P0C2I2 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-DR6P0C2I3 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-LR2P0C2I5 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-LR3P0C2I6 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C TY1B-PR1P0C2I9 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C TY1B-PR2P0C2J0 1756 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-PR3P0C2J1 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C TY1B-JR1P47098 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-ML2Q03434 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C TY1B-ER1Q03612 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-ML1Q04711 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C TY1B-GR2Q12269 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-OLQ12273 1755 aa13.24□□□□□ -0.29
RRT8YOL048C TY1B-PLQ12414 1755 aaKnown RBP13.24□□□□□ -0.29
RRT8YOL048C SNQ2P32568 1501 aaKnown RBP13.22□□□□□ -0.29
RRT8YOL048C ESC1Q03661 1658 aaKnown RBP13.21□□□□□ -0.29
RRT8YOL048C DNF1P32660 1571 aa13.21□□□□□ -0.29
RRT8YOL048C FAP1P53971 965 aa13.21□□□□□ -0.29
RRT8YOL048C VTH1P40438 1549 aa13.2□□□□□ -0.3
RRT8YOL048C VTH2P40890 1549 aa13.2□□□□□ -0.3
RRT8YOL048C IFH1P39520 1085 aa13.18□□□□□ -0.3
RRT8YOL048C RTT106P40161 455 aa13.14□□□□□ -0.31
RRT8YOL048C RPA190P10964 1664 aaKnown RBP13.09□□□□□ -0.31
RRT8YOL048C PDR15Q04182 1529 aaKnown RBP13.06□□□□□ -0.32
RRT8YOL048C NUP159P40477 1460 aa13.05□□□□□ -0.32
RRT8YOL048C MET5P47169 1442 aa13.05□□□□□ -0.32
RRT8YOL048C SNT2P53127 1403 aa13.04□□□□□ -0.32
RRT8YOL048C MLP2P40457 1679 aa13.02□□□□□ -0.32
RRT8YOL048C TY1B-JR2P47100 1755 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms