RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS2YOL047C FAP1P53971 965 aa9.27□□□□□ -0.93
LDS2YOL047C MTC1P47018 478 aaKnown RBP9.17□□□□□ -0.94
LDS2YOL047C PRY3P47033 881 aa8.73□□□□□ -1.01
LDS2YOL047C AAD16Q02895 342 aa8.29□□□□□ -1.08
LDS2YOL047C PRI1P10363 409 aa8.22□□□□□ -1.09
LDS2YOL047C HAA1Q12753 694 aaKnown RBP8.15□□□□□ -1.1
LDS2YOL047C YCK3P39962 524 aa8.14□□□□□ -1.11
LDS2YOL047C DRS1P32892 752 aaKnown RBP7.96□□□□□ -1.14
LDS2YOL047C ISW2Q08773 1120 aa7.82□□□□□ -1.16
LDS2YOL047C RPG1P38249 964 aaKnown RBP7.74□□□□□ -1.17
LDS2YOL047C TSR3Q12094 313 aaKnown RBP7.72□□□□□ -1.17
LDS2YOL047C MRPL32P25348 183 aa7.45□□□□□ -1.22
LDS2YOL047C YGL015CP33199 130 aa7.38□□□□□ -1.23
LDS2YOL047C TFA1P36100 482 aa7.24□□□□□ -1.25
LDS2YOL047C BFR2Q06631 534 aaKnown RBP7.22□□□□□ -1.25
LDS2YOL047C BUD31P25337 157 aaPredicted RBP7.13□□□□□ -1.27
LDS2YOL047C RSE1Q04693 1361 aaKnown RBP7.09□□□□□ -1.27
LDS2YOL047C DIP2Q12220 943 aaPredicted RBP7.07□□□□□ -1.28
LDS2YOL047C REB1P21538 810 aa6.98□□□□□ -1.29
LDS2YOL047C RPL17AP05740 184 aaKnown RBP6.91□□□□□ -1.3
LDS2YOL047C RPL17BP46990 184 aaKnown RBP6.91□□□□□ -1.3
LDS2YOL047C CDC27P38042 758 aa6.88□□□□□ -1.31
LDS2YOL047C UBP10P53874 792 aaPredicted RBP6.83□□□□□ -1.32
LDS2YOL047C RQC2Q12532 1038 aaKnown RBP6.81□□□□□ -1.32
LDS2YOL047C MAP2P38174 421 aaKnown RBP6.78□□□□□ -1.32
LDS2YOL047C SIS1P25294 352 aaKnown RBP6.73□□□□□ -1.33
LDS2YOL047C YKR023WP36119 530 aaKnown RBP6.65□□□□□ -1.34
LDS2YOL047C UBP9P39967 754 aa6.64□□□□□ -1.35
LDS2YOL047C TIF4632P39936 914 aaKnown RBP6.59□□□□□ -1.35
LDS2YOL047C AVT3P36062 692 aa6.57□□□□□ -1.36
LDS2YOL047C TAF7Q05021 590 aa6.57□□□□□ -1.36
LDS2YOL047C TGL3P40308 642 aa6.54□□□□□ -1.36
LDS2YOL047C HOP09932 586 aa6.53□□□□□ -1.36
LDS2YOL047C DCD1P06773 312 aa6.52□□□□□ -1.37
LDS2YOL047C SPT21P35209 758 aa6.52□□□□□ -1.37
LDS2YOL047C TFC8Q12308 588 aa6.52□□□□□ -1.37
LDS2YOL047C SCY1P53009 804 aa6.5□□□□□ -1.37
LDS2YOL047C SLX5P32828 619 aaKnown RBP6.48□□□□□ -1.37
LDS2YOL047C DMA1P38823 416 aa6.39□□□□□ -1.39
LDS2YOL047C BCH2P36122 765 aa6.28□□□□□ -1.4
LDS2YOL047C YBL029C-AQ3E756 94 aa6.2□□□□□ -1.42
LDS2YOL047C MST1P07236 462 aa6.15□□□□□ -1.42
LDS2YOL047C RIM101P33400 625 aa6.11□□□□□ -1.43
LDS2YOL047C YOR238WQ08634 303 aa6.11□□□□□ -1.43
LDS2YOL047C VNX1P42839 908 aa6.09□□□□□ -1.43
LDS2YOL047C BDF1P35817 686 aa6.06□□□□□ -1.44
LDS2YOL047C EPS1P40557 701 aa6.06□□□□□ -1.44
LDS2YOL047C SPP1Q03012 353 aa6.06□□□□□ -1.44
LDS2YOL047C LEO1P38439 464 aa6.04□□□□□ -1.44
LDS2YOL047C YJL171CP46992 396 aa6.04□□□□□ -1.44
LDS2YOL047C NSR1P27476 414 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
LDS2YOL047C PTP3P40048 928 aa5.99□□□□□ -1.45
LDS2YOL047C AIR2Q12476 344 aaKnown RBP5.99□□□□□ -1.45
LDS2YOL047C WSC3Q12215 556 aa5.98□□□□□ -1.45
LDS2YOL047C FKH1P40466 484 aa5.95□□□□□ -1.46
LDS2YOL047C YAP5P40574 245 aa5.95□□□□□ -1.46
LDS2YOL047C TIF11P38912 153 aaKnown RBP5.92□□□□□ -1.46
LDS2YOL047C OXP1P28273 1286 aa5.86□□□□□ -1.47
LDS2YOL047C GTT3P39996 337 aa5.86□□□□□ -1.47
LDS2YOL047C BMT6Q12291 365 aa5.86□□□□□ -1.47
LDS2YOL047C LDB19Q12502 818 aa5.85□□□□□ -1.47
LDS2YOL047C YIL055CP40523 627 aaKnown RBP5.84□□□□□ -1.47
LDS2YOL047C BBC1P47068 1157 aa5.84□□□□□ -1.47
LDS2YOL047C ULI1P43604 169 aa5.8□□□□□ -1.48
LDS2YOL047C IOC2Q12072 812 aa5.78□□□□□ -1.48
LDS2YOL047C AI2P03876 854 aa5.75□□□□□ -1.49
LDS2YOL047C DMA2P53924 522 aa5.74□□□□□ -1.49
LDS2YOL047C RSM7P47150 247 aa5.73□□□□□ -1.49
LDS2YOL047C LEU3P08638 886 aa5.7□□□□□ -1.5
LDS2YOL047C EAP1P36041 632 aaKnown RBP5.68□□□□□ -1.5
LDS2YOL047C MSB4Q12317 492 aa5.68□□□□□ -1.5
LDS2YOL047C ABP1P15891 592 aaKnown RBP5.67□□□□□ -1.5
LDS2YOL047C PIB1Q06651 286 aa5.67□□□□□ -1.5
LDS2YOL047C RTG1P32607 177 aa5.66□□□□□ -1.5
LDS2YOL047C SSP1P38871 571 aa5.64□□□□□ -1.51
LDS2YOL047C NCR1Q12200 1170 aa5.64□□□□□ -1.51
LDS2YOL047C SAS10Q12136 610 aaPredicted RBP5.62□□□□□ -1.51
LDS2YOL047C YAH1Q12184 172 aaKnown RBP5.61□□□□□ -1.51
LDS2YOL047C TRP5P00931 707 aaKnown RBP5.6□□□□□ -1.51
LDS2YOL047C SEC61P32915 480 aa5.58□□□□□ -1.52
LDS2YOL047C SET4P42948 560 aa5.58□□□□□ -1.52
LDS2YOL047C YNL035CP53962 389 aaKnown RBP5.58□□□□□ -1.52
LDS2YOL047C YOL036WQ08206 761 aa5.57□□□□□ -1.52
LDS2YOL047C BCK2P33306 851 aa5.56□□□□□ -1.52
LDS2YOL047C TFG1P41895 735 aaPredicted RBP5.55□□□□□ -1.52
LDS2YOL047C MRM1P25270 412 aa5.49□□□□□ -1.53
LDS2YOL047C SAP30P38429 201 aa5.49□□□□□ -1.53
LDS2YOL047C RPN1P38764 993 aaKnown RBP5.49□□□□□ -1.53
LDS2YOL047C CHL1P22516 861 aaPredicted RBP5.48□□□□□ -1.53
LDS2YOL047C PSD2P53037 1138 aaKnown RBP5.48□□□□□ -1.53
LDS2YOL047C RLF2Q12495 606 aa5.48□□□□□ -1.53
LDS2YOL047C YMR1P47147 688 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
LDS2YOL047C YLR271WQ06152 274 aa5.45□□□□□ -1.54
LDS2YOL047C IFH1P39520 1085 aa5.44□□□□□ -1.54
LDS2YOL047C VMA1P17255 1071 aaKnown RBP5.43□□□□□ -1.54
LDS2YOL047C DBP1P24784 617 aaKnown RBP5.43□□□□□ -1.54
LDS2YOL047C PRE3P38624 215 aa5.43□□□□□ -1.54
LDS2YOL047C YDL129WQ07555 291 aa5.43□□□□□ -1.54
LDS2YOL047C DAN4P47179 1161 aa5.42□□□□□ -1.54
LDS2YOL047C JIP4Q03361 876 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms