RNA–Protein interactions for RNA: YNR018W

RCF2, Transcript of Cytochrome c oxidase subunit, yeastyeast

Gene RCF2, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCF2YNR018W SGS1P35187 1447 aa12.97□□□□□ -0.33
RCF2YNR018W INO80P53115 1489 aa12.71□□□□□ -0.38
RCF2YNR018W SPA2P23201 1466 aaKnown RBP12.64□□□□□ -0.39
RCF2YNR018W SSN2P38931 1420 aa12.51□□□□□ -0.41
RCF2YNR018W TCB3Q03640 1545 aaKnown RBP12.46□□□□□ -0.42
RCF2YNR018W TY1B-DR4Q07793 1604 aa12.34□□□□□ -0.43
RCF2YNR018W HSL1P34244 1518 aa12.11□□□□□ -0.47
RCF2YNR018W DRS1P32892 752 aaKnown RBP12.07□□□□□ -0.48
RCF2YNR018W MON2P48563 1636 aaPredicted RBP12.07□□□□□ -0.48
RCF2YNR018W SPT6P23615 1451 aaKnown RBP12.04□□□□□ -0.48
RCF2YNR018W HIR3P47171 1648 aa11.92□□□□□ -0.5
RCF2YNR018W SWR1Q05471 1514 aa11.91□□□□□ -0.5
RCF2YNR018W XRN1P22147 1528 aaKnown RBP11.82□□□□□ -0.52
RCF2YNR018W REV3P14284 1504 aa11.7□□□□□ -0.54
RCF2YNR018W THO2P53552 1597 aaKnown RBP11.68□□□□□ -0.54
RCF2YNR018W SIN3P22579 1536 aa11.68□□□□□ -0.54
RCF2YNR018W SSK2P53599 1579 aa11.62□□□□□ -0.55
RCF2YNR018W ESP1Q03018 1630 aa11.52□□□□□ -0.57
RCF2YNR018W MYO2P19524 1574 aaKnown RBP11.48□□□□□ -0.57
RCF2YNR018W KOG1P38873 1557 aa11.46□□□□□ -0.57
RCF2YNR018W TAF2P23255 1407 aa11.46□□□□□ -0.57
RCF2YNR018W DNA2P38859 1522 aa11.44□□□□□ -0.58
RCF2YNR018W SKI3P17883 1432 aaKnown RBP11.42□□□□□ -0.58
RCF2YNR018W CHD1P32657 1468 aa11.4□□□□□ -0.58
RCF2YNR018W ATG2P53855 1592 aa11.38□□□□□ -0.59
RCF2YNR018W BUD4P47136 1447 aa11.37□□□□□ -0.59
RCF2YNR018W MMS22Q06164 1454 aa11.33□□□□□ -0.6
RCF2YNR018W POL1P13382 1468 aa11.32□□□□□ -0.6
RCF2YNR018W YPK9Q12697 1472 aa11.29□□□□□ -0.6
RCF2YNR018W ECM5Q03214 1411 aa11.28□□□□□ -0.6
RCF2YNR018W STU1P38198 1513 aa11.26□□□□□ -0.61
RCF2YNR018W PEP1P32319 1579 aa11.24□□□□□ -0.61
RCF2YNR018W MDS3P53094 1487 aa11.18□□□□□ -0.62
RCF2YNR018W YTA7P40340 1379 aa11.17□□□□□ -0.62
RCF2YNR018W RKR1Q04781 1562 aa11.17□□□□□ -0.62
RCF2YNR018W SCC2Q04002 1493 aa11.17□□□□□ -0.62
RCF2YNR018W BPT1P14772 1559 aa11.15□□□□□ -0.62
RCF2YNR018W YOR1P53049 1477 aa11.12□□□□□ -0.63
RCF2YNR018W RPO31P04051 1460 aa11.11□□□□□ -0.63
RCF2YNR018W MYO4P32492 1471 aa11.08□□□□□ -0.64
RCF2YNR018W TY2B-LR1P0C2J3 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-FP0CX63 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-GR2P0CX64 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-CP25384 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-DR2Q03494 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY1B-DR1Q03855 1755 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-DR3Q07791 1770 aaKnown RBP11.06□□□□□ -0.64
RCF2YNR018W TY2B-OR1Q12113 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-DR1Q12472 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TY2B-OR2Q12501 1770 aa11.06□□□□□ -0.64
RCF2YNR018W TOP2P06786 1428 aaKnown RBP11.04□□□□□ -0.64
RCF2YNR018W TY1B-DR3Q99231 1755 aa11.04□□□□□ -0.64
RCF2YNR018W YCF1P39109 1515 aaKnown RBP11.04□□□□□ -0.64
RCF2YNR018W SMC4Q12267 1418 aa11.03□□□□□ -0.64
RCF2YNR018W UFD4P33202 1483 aa11□□□□□ -0.65
RCF2YNR018W TY2B-BQ12491 1770 aa10.98□□□□□ -0.65
RCF2YNR018W SAS10Q12136 610 aaPredicted RBP10.97□□□□□ -0.65
RCF2YNR018W TRM732Q03496 1420 aa10.92□□□□□ -0.66
RCF2YNR018W SNQ2P32568 1501 aaKnown RBP10.92□□□□□ -0.66
RCF2YNR018W MLP2P40457 1679 aa10.92□□□□□ -0.66
RCF2YNR018W TY1B-HO13535 1793 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-DR5P0C2I2 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-DR6P0C2I3 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-LR2P0C2I5 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-LR3P0C2I6 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-PR1P0C2I9 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-PR2P0C2J0 1756 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-PR3P0C2J1 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-JR1P47098 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-ML2Q03434 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-ER1Q03612 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-ML1Q04711 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-GR2Q12269 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-OLQ12273 1755 aa10.9□□□□□ -0.67
RCF2YNR018W TY1B-PLQ12414 1755 aaKnown RBP10.9□□□□□ -0.67
RCF2YNR018W TY1B-BRQ12193 1756 aa10.88□□□□□ -0.67
RCF2YNR018W TY1B-GR3Q12316 1755 aa10.88□□□□□ -0.67
RCF2YNR018W TY1B-ORQ92393 1755 aa10.88□□□□□ -0.67
RCF2YNR018W TAF7Q05021 590 aa10.85□□□□□ -0.67
RCF2YNR018W STH1P32597 1359 aa10.84□□□□□ -0.67
RCF2YNR018W IKI3Q06706 1349 aaKnown RBP10.84□□□□□ -0.67
RCF2YNR018W RSE1Q04693 1361 aaKnown RBP10.83□□□□□ -0.68
RCF2YNR018W NUP170P38181 1502 aa10.81□□□□□ -0.68
RCF2YNR018W PDR15Q04182 1529 aaKnown RBP10.81□□□□□ -0.68
RCF2YNR018W ULS1Q08562 1619 aa10.8□□□□□ -0.68
RCF2YNR018W SPP41P38904 1435 aa10.77□□□□□ -0.68
RCF2YNR018W GEA1P47102 1408 aaPredicted RBP10.73□□□□□ -0.69
RCF2YNR018W VTH1P40438 1549 aa10.73□□□□□ -0.69
RCF2YNR018W VTH2P40890 1549 aa10.73□□□□□ -0.69
RCF2YNR018W CDC25P04821 1589 aa10.73□□□□□ -0.69
RCF2YNR018W TY1B-JR2P47100 1755 aaKnown RBP10.72□□□□□ -0.69
RCF2YNR018W TY1B-ER2Q03619 1755 aa10.72□□□□□ -0.69
RCF2YNR018W TY1B-MR1Q04214 1755 aa10.72□□□□□ -0.69
RCF2YNR018W TY1B-MR2Q04670 1755 aaKnown RBP10.72□□□□□ -0.69
RCF2YNR018W TY1B-LR1Q12088 1755 aaKnown RBP10.72□□□□□ -0.69
RCF2YNR018W TY1B-NL1Q12112 1755 aa10.72□□□□□ -0.69
RCF2YNR018W TY1B-GR1Q12141 1755 aa10.72□□□□□ -0.69
RCF2YNR018W TY1B-BLQ12490 1755 aa10.72□□□□□ -0.69
RCF2YNR018W TSC11P40061 1430 aa10.69□□□□□ -0.7
RCF2YNR018W MTC1P47018 478 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms