RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W MTC1P47018 478 aaKnown RBP17.13■□□□□ 0.33
SSU72YNL222W DRS1P32892 752 aaKnown RBP16.46■□□□□ 0.23
SSU72YNL222W FAP1P53971 965 aa15.3■□□□□ 0.04
SSU72YNL222W PRI1P10363 409 aa14.36□□□□□ -0.11
SSU72YNL222W PRY3P47033 881 aa14.36□□□□□ -0.11
SSU72YNL222W AAD16Q02895 342 aa14.27□□□□□ -0.13
SSU72YNL222W ISW2Q08773 1120 aa14.21□□□□□ -0.13
SSU72YNL222W DIP2Q12220 943 aaPredicted RBP14.19□□□□□ -0.14
SSU72YNL222W RPG1P38249 964 aaKnown RBP14.02□□□□□ -0.17
SSU72YNL222W BFR2Q06631 534 aaKnown RBP13.98□□□□□ -0.17
SSU72YNL222W AVT3P36062 692 aa13.84□□□□□ -0.19
SSU72YNL222W RSE1Q04693 1361 aaKnown RBP13.62□□□□□ -0.23
SSU72YNL222W TSR3Q12094 313 aaKnown RBP13.58□□□□□ -0.24
SSU72YNL222W HAA1Q12753 694 aaKnown RBP13.49□□□□□ -0.25
SSU72YNL222W YCK3P39962 524 aa13.46□□□□□ -0.25
SSU72YNL222W RPL17AP05740 184 aaKnown RBP13.17□□□□□ -0.3
SSU72YNL222W RPL17BP46990 184 aaKnown RBP13.17□□□□□ -0.3
SSU72YNL222W REB1P21538 810 aa13.12□□□□□ -0.31
SSU72YNL222W MRPL32P25348 183 aa13.09□□□□□ -0.31
SSU72YNL222W TFA1P36100 482 aa12.72□□□□□ -0.37
SSU72YNL222W SPT21P35209 758 aa12.56□□□□□ -0.4
SSU72YNL222W YGL015CP33199 130 aa12.51□□□□□ -0.41
SSU72YNL222W YKR023WP36119 530 aaKnown RBP12.4□□□□□ -0.42
SSU72YNL222W CDC27P38042 758 aa12.4□□□□□ -0.42
SSU72YNL222W RIM101P33400 625 aa12.24□□□□□ -0.45
SSU72YNL222W HOP09932 586 aa12.16□□□□□ -0.46
SSU72YNL222W TFC8Q12308 588 aa12.16□□□□□ -0.46
SSU72YNL222W DCD1P06773 312 aa12.09□□□□□ -0.47
SSU72YNL222W UBP10P53874 792 aaPredicted RBP12.08□□□□□ -0.48
SSU72YNL222W MAP2P38174 421 aaKnown RBP12.02□□□□□ -0.49
SSU72YNL222W OXP1P28273 1286 aa11.87□□□□□ -0.51
SSU72YNL222W SCY1P53009 804 aa11.81□□□□□ -0.52
SSU72YNL222W BCH2P36122 765 aa11.76□□□□□ -0.53
SSU72YNL222W PTP3P40048 928 aa11.68□□□□□ -0.54
SSU72YNL222W YIL055CP40523 627 aaKnown RBP11.68□□□□□ -0.54
SSU72YNL222W SLX5P32828 619 aaKnown RBP11.67□□□□□ -0.54
SSU72YNL222W YAH1Q12184 172 aaKnown RBP11.65□□□□□ -0.54
SSU72YNL222W TIF4632P39936 914 aaKnown RBP11.61□□□□□ -0.55
SSU72YNL222W TGL3P40308 642 aa11.53□□□□□ -0.56
SSU72YNL222W EPS1P40557 701 aa11.5□□□□□ -0.57
SSU72YNL222W RSM7P47150 247 aa11.5□□□□□ -0.57
SSU72YNL222W BDF1P35817 686 aa11.44□□□□□ -0.58
SSU72YNL222W SSP1P38871 571 aa11.44□□□□□ -0.58
SSU72YNL222W YLR271WQ06152 274 aa11.43□□□□□ -0.58
SSU72YNL222W BUD31P25337 157 aaPredicted RBP11.38□□□□□ -0.59
SSU72YNL222W BBC1P47068 1157 aa11.37□□□□□ -0.59
SSU72YNL222W AI2P03876 854 aa11.36□□□□□ -0.59
SSU72YNL222W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
SSU72YNL222W PSD2P53037 1138 aaKnown RBP11.19□□□□□ -0.62
SSU72YNL222W UBP9P39967 754 aa11.17□□□□□ -0.62
SSU72YNL222W MGA2P40578 1113 aa11.09□□□□□ -0.63
SSU72YNL222W CST9Q06032 482 aa11.08□□□□□ -0.64
SSU72YNL222W NSR1P27476 414 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
SSU72YNL222W YOR238WQ08634 303 aa11.05□□□□□ -0.64
SSU72YNL222W MST1P07236 462 aa11.03□□□□□ -0.64
SSU72YNL222W MRM1P25270 412 aa11□□□□□ -0.65
SSU72YNL222W YAP5P40574 245 aa11□□□□□ -0.65
SSU72YNL222W SIS1P25294 352 aaKnown RBP10.89□□□□□ -0.67
SSU72YNL222W YBL029C-AQ3E756 94 aa10.84□□□□□ -0.67
SSU72YNL222W RTG3P38165 486 aa10.78□□□□□ -0.68
SSU72YNL222W GTT3P39996 337 aa10.78□□□□□ -0.68
SSU72YNL222W RCR1P38212 213 aa10.77□□□□□ -0.69
SSU72YNL222W VNX1P42839 908 aa10.74□□□□□ -0.69
SSU72YNL222W PIB1Q06651 286 aa10.73□□□□□ -0.69
SSU72YNL222W WSC3Q12215 556 aa10.73□□□□□ -0.69
SSU72YNL222W VPS29P38759 282 aa10.72□□□□□ -0.69
SSU72YNL222W YMR1P47147 688 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
SSU72YNL222W SPP1Q03012 353 aa10.67□□□□□ -0.7
SSU72YNL222W YFR006WP43590 535 aa10.62□□□□□ -0.71
SSU72YNL222W DBP1P24784 617 aaKnown RBP10.61□□□□□ -0.71
SSU72YNL222W STS1P38637 319 aa10.6□□□□□ -0.71
SSU72YNL222W TIF11P38912 153 aaKnown RBP10.59□□□□□ -0.71
SSU72YNL222W RAM2P29703 316 aa10.58□□□□□ -0.72
SSU72YNL222W MSB4Q12317 492 aa10.5□□□□□ -0.73
SSU72YNL222W VMA1P17255 1071 aaKnown RBP10.48□□□□□ -0.73
SSU72YNL222W ULI1P43604 169 aa10.48□□□□□ -0.73
SSU72YNL222W YOL036WQ08206 761 aa10.46□□□□□ -0.73
SSU72YNL222W MAK11P20484 414 aaKnown RBP10.45□□□□□ -0.74
SSU72YNL222W EAP1P36041 632 aaKnown RBP10.44□□□□□ -0.74
SSU72YNL222W SET4P42948 560 aa10.44□□□□□ -0.74
SSU72YNL222W LDB19Q12502 818 aa10.41□□□□□ -0.74
SSU72YNL222W SAM3Q08986 587 aa10.4□□□□□ -0.74
SSU72YNL222W IOC2Q12072 812 aa10.4□□□□□ -0.74
SSU72YNL222W FKH1P40466 484 aa10.39□□□□□ -0.75
SSU72YNL222W AIR2Q12476 344 aaKnown RBP10.36□□□□□ -0.75
SSU72YNL222W MIF2P35201 549 aa10.35□□□□□ -0.75
SSU72YNL222W COQ8P27697 501 aa10.33□□□□□ -0.76
SSU72YNL222W YJL171CP46992 396 aa10.33□□□□□ -0.76
SSU72YNL222W TRP5P00931 707 aaKnown RBP10.32□□□□□ -0.76
SSU72YNL222W EDS1P38073 919 aa10.31□□□□□ -0.76
SSU72YNL222W DMA1P38823 416 aa10.29□□□□□ -0.76
SSU72YNL222W GYP5Q12344 894 aa10.29□□□□□ -0.76
SSU72YNL222W ABP1P15891 592 aaKnown RBP10.28□□□□□ -0.76
SSU72YNL222W RTG1P32607 177 aa10.26□□□□□ -0.77
SSU72YNL222W YNL035CP53962 389 aaKnown RBP10.24□□□□□ -0.77
SSU72YNL222W PTC3P34221 468 aaKnown RBP10.23□□□□□ -0.77
SSU72YNL222W SET1P38827 1080 aaKnown RBP10.21□□□□□ -0.77
SSU72YNL222W HTA1P04911 132 aaKnown RBP10.2□□□□□ -0.78
SSU72YNL222W HTA2P04912 132 aa10.2□□□□□ -0.78
SSU72YNL222W DCW1P36091 449 aa10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms