RNA–Protein interactions for RNA: YNL004W

HRB1, Transcript of Poly(A+) RNA-binding protein, yeastyeast

Gene HRB1, Length 1,365 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRB1YNL004W INO80P53115 1489 aa13.75□□□□□ -0.21
HRB1YNL004W SGS1P35187 1447 aa13.63□□□□□ -0.23
HRB1YNL004W MON2P48563 1636 aaPredicted RBP13.61□□□□□ -0.23
HRB1YNL004W TCB3Q03640 1545 aaKnown RBP13.41□□□□□ -0.26
HRB1YNL004W TY1B-DR4Q07793 1604 aa13.22□□□□□ -0.29
HRB1YNL004W SWR1Q05471 1514 aa13.2□□□□□ -0.3
HRB1YNL004W DNA2P38859 1522 aa13.06□□□□□ -0.32
HRB1YNL004W SPT6P23615 1451 aaKnown RBP12.94□□□□□ -0.34
HRB1YNL004W HSL1P34244 1518 aa12.92□□□□□ -0.34
HRB1YNL004W SPA2P23201 1466 aaKnown RBP12.89□□□□□ -0.35
HRB1YNL004W KOG1P38873 1557 aa12.89□□□□□ -0.35
HRB1YNL004W SSN2P38931 1420 aa12.74□□□□□ -0.37
HRB1YNL004W HIR3P47171 1648 aa12.68□□□□□ -0.38
HRB1YNL004W XRN1P22147 1528 aaKnown RBP12.58□□□□□ -0.4
HRB1YNL004W ECM5Q03214 1411 aa12.54□□□□□ -0.4
HRB1YNL004W DRS1P32892 752 aaKnown RBP12.5□□□□□ -0.41
HRB1YNL004W BUD4P47136 1447 aa12.45□□□□□ -0.42
HRB1YNL004W RSE1Q04693 1361 aaKnown RBP12.42□□□□□ -0.42
HRB1YNL004W THO2P53552 1597 aaKnown RBP12.39□□□□□ -0.43
HRB1YNL004W REV3P14284 1504 aa12.33□□□□□ -0.44
HRB1YNL004W TAF2P23255 1407 aa12.31□□□□□ -0.44
HRB1YNL004W MDS3P53094 1487 aa12.24□□□□□ -0.45
HRB1YNL004W MTC1P47018 478 aaKnown RBP12.22□□□□□ -0.45
HRB1YNL004W SKI3P17883 1432 aaKnown RBP12.19□□□□□ -0.46
HRB1YNL004W SIN3P22579 1536 aa12.15□□□□□ -0.46
HRB1YNL004W PEP1P32319 1579 aa12.15□□□□□ -0.47
HRB1YNL004W ATG2P53855 1592 aa12.14□□□□□ -0.47
HRB1YNL004W SSK2P53599 1579 aa12.08□□□□□ -0.48
HRB1YNL004W ESP1Q03018 1630 aa12□□□□□ -0.49
HRB1YNL004W BPT1P14772 1559 aa11.91□□□□□ -0.5
HRB1YNL004W MYO2P19524 1574 aaKnown RBP11.9□□□□□ -0.5
HRB1YNL004W YPK9Q12697 1472 aa11.89□□□□□ -0.51
HRB1YNL004W UFD4P33202 1483 aa11.88□□□□□ -0.51
HRB1YNL004W SCC2Q04002 1493 aa11.83□□□□□ -0.52
HRB1YNL004W RPO31P04051 1460 aa11.77□□□□□ -0.52
HRB1YNL004W RQC2Q12532 1038 aaKnown RBP11.77□□□□□ -0.53
HRB1YNL004W YCF1P39109 1515 aaKnown RBP11.69□□□□□ -0.54
HRB1YNL004W POL1P13382 1468 aa11.68□□□□□ -0.54
HRB1YNL004W TOP2P06786 1428 aaKnown RBP11.67□□□□□ -0.54
HRB1YNL004W STU1P38198 1513 aa11.64□□□□□ -0.55
HRB1YNL004W RKR1Q04781 1562 aa11.63□□□□□ -0.55
HRB1YNL004W CHD1P32657 1468 aa11.61□□□□□ -0.55
HRB1YNL004W TY2B-LR1P0C2J3 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-FP0CX63 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-GR2P0CX64 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-CP25384 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-DR2Q03494 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY1B-DR1Q03855 1755 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-DR3Q07791 1770 aaKnown RBP11.56□□□□□ -0.56
HRB1YNL004W TY2B-OR1Q12113 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-DR1Q12472 1770 aa11.56□□□□□ -0.56
HRB1YNL004W TY2B-OR2Q12501 1770 aa11.56□□□□□ -0.56
HRB1YNL004W YOR1P53049 1477 aa11.56□□□□□ -0.56
HRB1YNL004W CDC25P04821 1589 aa11.55□□□□□ -0.56
HRB1YNL004W SMC4Q12267 1418 aa11.54□□□□□ -0.56
HRB1YNL004W PAN1P32521 1480 aa11.52□□□□□ -0.57
HRB1YNL004W YTA7P40340 1379 aa11.51□□□□□ -0.57
HRB1YNL004W MMS22Q06164 1454 aa11.51□□□□□ -0.57
HRB1YNL004W TY1B-BRQ12193 1756 aa11.46□□□□□ -0.58
HRB1YNL004W TY1B-GR3Q12316 1755 aa11.46□□□□□ -0.58
HRB1YNL004W TY1B-ORQ92393 1755 aa11.46□□□□□ -0.58
HRB1YNL004W SPP41P38904 1435 aa11.44□□□□□ -0.58
HRB1YNL004W DNF1P32660 1571 aa11.44□□□□□ -0.58
HRB1YNL004W TY2B-BQ12491 1770 aa11.44□□□□□ -0.58
HRB1YNL004W TY1B-DR3Q99231 1755 aa11.44□□□□□ -0.58
HRB1YNL004W TRM732Q03496 1420 aa11.4□□□□□ -0.58
HRB1YNL004W ESC1Q03661 1658 aaKnown RBP11.4□□□□□ -0.58
HRB1YNL004W TY1B-HO13535 1793 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-DR5P0C2I2 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-DR6P0C2I3 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-LR2P0C2I5 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-LR3P0C2I6 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W TY1B-PR1P0C2I9 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W TY1B-PR2P0C2J0 1756 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-PR3P0C2J1 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W TY1B-JR1P47098 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-ML2Q03434 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W TY1B-ER1Q03612 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-ML1Q04711 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W TY1B-GR2Q12269 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-OLQ12273 1755 aa11.39□□□□□ -0.59
HRB1YNL004W TY1B-PLQ12414 1755 aaKnown RBP11.39□□□□□ -0.59
HRB1YNL004W SAS10Q12136 610 aaPredicted RBP11.38□□□□□ -0.59
HRB1YNL004W MET5P47169 1442 aa11.37□□□□□ -0.59
HRB1YNL004W TSC11P40061 1430 aa11.36□□□□□ -0.59
HRB1YNL004W MYO4P32492 1471 aa11.35□□□□□ -0.59
HRB1YNL004W RPA190P10964 1664 aaKnown RBP11.31□□□□□ -0.6
HRB1YNL004W STH1P32597 1359 aa11.29□□□□□ -0.6
HRB1YNL004W VTH1P40438 1549 aa11.29□□□□□ -0.6
HRB1YNL004W VTH2P40890 1549 aa11.29□□□□□ -0.6
HRB1YNL004W RTT106P40161 455 aa11.25□□□□□ -0.61
HRB1YNL004W NUP159P40477 1460 aa11.25□□□□□ -0.61
HRB1YNL004W TAF7Q05021 590 aa11.24□□□□□ -0.61
HRB1YNL004W SNQ2P32568 1501 aaKnown RBP11.21□□□□□ -0.61
HRB1YNL004W TY1B-JR2P47100 1755 aaKnown RBP11.18□□□□□ -0.62
HRB1YNL004W TY1B-ER2Q03619 1755 aa11.18□□□□□ -0.62
HRB1YNL004W TY1B-MR1Q04214 1755 aa11.18□□□□□ -0.62
HRB1YNL004W TY1B-MR2Q04670 1755 aaKnown RBP11.18□□□□□ -0.62
HRB1YNL004W TY1B-LR1Q12088 1755 aaKnown RBP11.18□□□□□ -0.62
HRB1YNL004W TY1B-NL1Q12112 1755 aa11.18□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms