RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeastyeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATM1YMR301C MON2P48563 1636 aaPredicted RBP9.94□□□□□ -0.82
ATM1YMR301C INO80P53115 1489 aa9.87□□□□□ -0.83
ATM1YMR301C SWR1Q05471 1514 aa9.47□□□□□ -0.89
ATM1YMR301C DNA2P38859 1522 aa9.45□□□□□ -0.9
ATM1YMR301C TY1B-DR4Q07793 1604 aa9.43□□□□□ -0.9
ATM1YMR301C TCB3Q03640 1545 aaKnown RBP9.4□□□□□ -0.91
ATM1YMR301C KOG1P38873 1557 aa9.3□□□□□ -0.92
ATM1YMR301C SGS1P35187 1447 aa9.27□□□□□ -0.93
ATM1YMR301C DRS1P32892 752 aaKnown RBP9.2□□□□□ -0.94
ATM1YMR301C HSL1P34244 1518 aa9.09□□□□□ -0.95
ATM1YMR301C SPT6P23615 1451 aaKnown RBP9.06□□□□□ -0.96
ATM1YMR301C RSE1Q04693 1361 aaKnown RBP9.03□□□□□ -0.96
ATM1YMR301C SPA2P23201 1466 aaKnown RBP8.96□□□□□ -0.98
ATM1YMR301C HIR3P47171 1648 aa8.89□□□□□ -0.99
ATM1YMR301C ECM5Q03214 1411 aa8.83□□□□□ -1
ATM1YMR301C THO2P53552 1597 aaKnown RBP8.8□□□□□ -1
ATM1YMR301C BUD4P47136 1447 aa8.77□□□□□ -1.01
ATM1YMR301C XRN1P22147 1528 aaKnown RBP8.71□□□□□ -1.01
ATM1YMR301C MDS3P53094 1487 aa8.71□□□□□ -1.02
ATM1YMR301C PEP1P32319 1579 aa8.63□□□□□ -1.03
ATM1YMR301C MTC1P47018 478 aaKnown RBP8.6□□□□□ -1.03
ATM1YMR301C ATG2P53855 1592 aa8.6□□□□□ -1.03
ATM1YMR301C REV3P14284 1504 aa8.57□□□□□ -1.04
ATM1YMR301C SSN2P38931 1420 aa8.57□□□□□ -1.04
ATM1YMR301C BPT1P14772 1559 aa8.48□□□□□ -1.05
ATM1YMR301C SIN3P22579 1536 aa8.47□□□□□ -1.05
ATM1YMR301C TAF2P23255 1407 aa8.46□□□□□ -1.05
ATM1YMR301C SKI3P17883 1432 aaKnown RBP8.43□□□□□ -1.06
ATM1YMR301C SSK2P53599 1579 aa8.41□□□□□ -1.06
ATM1YMR301C ESP1Q03018 1630 aa8.39□□□□□ -1.07
ATM1YMR301C YCF1P39109 1515 aaKnown RBP8.33□□□□□ -1.08
ATM1YMR301C BFR2Q06631 534 aaKnown RBP8.28□□□□□ -1.08
ATM1YMR301C UFD4P33202 1483 aa8.27□□□□□ -1.09
ATM1YMR301C MYO2P19524 1574 aaKnown RBP8.24□□□□□ -1.09
ATM1YMR301C SCC2Q04002 1493 aa8.24□□□□□ -1.09
ATM1YMR301C TFA1P36100 482 aa8.23□□□□□ -1.09
ATM1YMR301C YPK9Q12697 1472 aa8.22□□□□□ -1.09
ATM1YMR301C TY2B-LR1P0C2J3 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-FP0CX63 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-GR2P0CX64 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-CP25384 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-DR2Q03494 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY1B-DR1Q03855 1755 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-DR3Q07791 1770 aaKnown RBP8.2□□□□□ -1.1
ATM1YMR301C TY2B-OR1Q12113 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-DR1Q12472 1770 aa8.2□□□□□ -1.1
ATM1YMR301C TY2B-OR2Q12501 1770 aa8.2□□□□□ -1.1
ATM1YMR301C ESC1Q03661 1658 aaKnown RBP8.18□□□□□ -1.1
ATM1YMR301C RPO31P04051 1460 aa8.17□□□□□ -1.1
ATM1YMR301C CDC25P04821 1589 aa8.17□□□□□ -1.1
ATM1YMR301C TY1B-BRQ12193 1756 aa8.16□□□□□ -1.1
ATM1YMR301C TY1B-GR3Q12316 1755 aa8.16□□□□□ -1.1
ATM1YMR301C TY1B-ORQ92393 1755 aa8.16□□□□□ -1.1
ATM1YMR301C CHD1P32657 1468 aa8.13□□□□□ -1.11
ATM1YMR301C DNF1P32660 1571 aa8.12□□□□□ -1.11
ATM1YMR301C TY2B-BQ12491 1770 aa8.1□□□□□ -1.11
ATM1YMR301C TY1B-HO13535 1793 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-DR5P0C2I2 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-DR6P0C2I3 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-LR2P0C2I5 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-LR3P0C2I6 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-PR1P0C2I9 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-PR2P0C2J0 1756 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-PR3P0C2J1 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-JR1P47098 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-ML2Q03434 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-ER1Q03612 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-ML1Q04711 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-GR2Q12269 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-OLQ12273 1755 aa8.08□□□□□ -1.12
ATM1YMR301C TY1B-PLQ12414 1755 aaKnown RBP8.08□□□□□ -1.12
ATM1YMR301C TY1B-DR3Q99231 1755 aa8.08□□□□□ -1.12
ATM1YMR301C RPA190P10964 1664 aaKnown RBP8.07□□□□□ -1.12
ATM1YMR301C RQC2Q12532 1038 aaKnown RBP8.07□□□□□ -1.12
ATM1YMR301C PAN1P32521 1480 aa8.05□□□□□ -1.12
ATM1YMR301C MET5P47169 1442 aa8.05□□□□□ -1.12
ATM1YMR301C RKR1Q04781 1562 aa8.04□□□□□ -1.12
ATM1YMR301C TOP2P06786 1428 aaKnown RBP8.03□□□□□ -1.12
ATM1YMR301C MMS22Q06164 1454 aa7.98□□□□□ -1.13
ATM1YMR301C POL1P13382 1468 aa7.97□□□□□ -1.13
ATM1YMR301C LTE1P07866 1435 aa7.96□□□□□ -1.14
ATM1YMR301C BNI1P41832 1953 aa7.94□□□□□ -1.14
ATM1YMR301C YRF1-1P0CX20 1796 aa7.92□□□□□ -1.14
ATM1YMR301C YRF1-5P0CX21 1796 aa7.92□□□□□ -1.14
ATM1YMR301C YRF1-8P0CX22 1796 aa7.92□□□□□ -1.14
ATM1YMR301C STU1P38198 1513 aa7.92□□□□□ -1.14
ATM1YMR301C YOR1P53049 1477 aa7.91□□□□□ -1.14
ATM1YMR301C TY1B-JR2P47100 1755 aaKnown RBP7.91□□□□□ -1.14
ATM1YMR301C TY1B-ER2Q03619 1755 aa7.91□□□□□ -1.14
ATM1YMR301C TY1B-MR1Q04214 1755 aa7.91□□□□□ -1.14
ATM1YMR301C TY1B-MR2Q04670 1755 aaKnown RBP7.91□□□□□ -1.14
ATM1YMR301C TY1B-LR1Q12088 1755 aaKnown RBP7.91□□□□□ -1.14
ATM1YMR301C TY1B-NL1Q12112 1755 aa7.91□□□□□ -1.14
ATM1YMR301C TY1B-GR1Q12141 1755 aa7.91□□□□□ -1.14
ATM1YMR301C TY1B-BLQ12490 1755 aa7.91□□□□□ -1.14
ATM1YMR301C TRM732Q03496 1420 aa7.91□□□□□ -1.14
ATM1YMR301C SMC4Q12267 1418 aa7.89□□□□□ -1.15
ATM1YMR301C GEA2P39993 1459 aaKnown RBP7.89□□□□□ -1.15
ATM1YMR301C NTE1Q04958 1679 aa7.89□□□□□ -1.15
ATM1YMR301C SPP41P38904 1435 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms