RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W SGS1P35187 1447 aa21.26■□□□□ 0.99
CUE1YMR264W INO80P53115 1489 aa20.89■□□□□ 0.94
CUE1YMR264W TCB3Q03640 1545 aaKnown RBP20.63■□□□□ 0.89
CUE1YMR264W TY1B-DR4Q07793 1604 aa20.41■□□□□ 0.86
CUE1YMR264W SPA2P23201 1466 aaKnown RBP20.39■□□□□ 0.85
CUE1YMR264W MON2P48563 1636 aaPredicted RBP20.32■□□□□ 0.84
CUE1YMR264W SSN2P38931 1420 aa20.31■□□□□ 0.84
CUE1YMR264W HSL1P34244 1518 aa20.01■□□□□ 0.79
CUE1YMR264W SPT6P23615 1451 aaKnown RBP19.93■□□□□ 0.78
CUE1YMR264W SWR1Q05471 1514 aa19.92■□□□□ 0.78
CUE1YMR264W DRS1P32892 752 aaKnown RBP19.67■□□□□ 0.74
CUE1YMR264W HIR3P47171 1648 aa19.65■□□□□ 0.74
CUE1YMR264W XRN1P22147 1528 aaKnown RBP19.5■□□□□ 0.71
CUE1YMR264W DNA2P38859 1522 aa19.32■□□□□ 0.68
CUE1YMR264W KOG1P38873 1557 aa19.28■□□□□ 0.68
CUE1YMR264W REV3P14284 1504 aa19.26■□□□□ 0.67
CUE1YMR264W SIN3P22579 1536 aa19.13■□□□□ 0.65
CUE1YMR264W THO2P53552 1597 aaKnown RBP19.12■□□□□ 0.65
CUE1YMR264W SSK2P53599 1579 aa19.02■□□□□ 0.64
CUE1YMR264W TAF2P23255 1407 aa18.96■□□□□ 0.63
CUE1YMR264W BUD4P47136 1447 aa18.95■□□□□ 0.62
CUE1YMR264W ESP1Q03018 1630 aa18.87■□□□□ 0.61
CUE1YMR264W ECM5Q03214 1411 aa18.86■□□□□ 0.61
CUE1YMR264W MYO2P19524 1574 aaKnown RBP18.81■□□□□ 0.6
CUE1YMR264W ATG2P53855 1592 aa18.81■□□□□ 0.6
CUE1YMR264W SKI3P17883 1432 aaKnown RBP18.67■□□□□ 0.58
CUE1YMR264W MDS3P53094 1487 aa18.64■□□□□ 0.57
CUE1YMR264W PEP1P32319 1579 aa18.62■□□□□ 0.57
CUE1YMR264W YPK9Q12697 1472 aa18.56■□□□□ 0.56
CUE1YMR264W POL1P13382 1468 aa18.46■□□□□ 0.55
CUE1YMR264W SCC2Q04002 1493 aa18.39■□□□□ 0.54
CUE1YMR264W STU1P38198 1513 aa18.39■□□□□ 0.53
CUE1YMR264W RKR1Q04781 1562 aa18.3■□□□□ 0.52
CUE1YMR264W CHD1P32657 1468 aa18.3■□□□□ 0.52
CUE1YMR264W RPO31P04051 1460 aa18.29■□□□□ 0.52
CUE1YMR264W MMS22Q06164 1454 aa18.24■□□□□ 0.51
CUE1YMR264W UFD4P33202 1483 aa18.22■□□□□ 0.51
CUE1YMR264W YOR1P53049 1477 aa18.2■□□□□ 0.5
CUE1YMR264W YTA7P40340 1379 aa18.2■□□□□ 0.5
CUE1YMR264W BPT1P14772 1559 aa18.17■□□□□ 0.5
CUE1YMR264W TOP2P06786 1428 aaKnown RBP18.16■□□□□ 0.5
CUE1YMR264W YCF1P39109 1515 aaKnown RBP18.16■□□□□ 0.5
CUE1YMR264W TY2B-LR1P0C2J3 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-FP0CX63 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-GR2P0CX64 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-CP25384 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-DR2Q03494 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY1B-DR1Q03855 1755 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-DR3Q07791 1770 aaKnown RBP18.14■□□□□ 0.49
CUE1YMR264W TY2B-OR1Q12113 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-DR1Q12472 1770 aa18.14■□□□□ 0.49
CUE1YMR264W TY2B-OR2Q12501 1770 aa18.14■□□□□ 0.49
CUE1YMR264W SMC4Q12267 1418 aa18.08■□□□□ 0.49
CUE1YMR264W MYO4P32492 1471 aa18.06■□□□□ 0.48
CUE1YMR264W TY1B-DR3Q99231 1755 aa18.04■□□□□ 0.48
CUE1YMR264W TY2B-BQ12491 1770 aa17.98■□□□□ 0.47
CUE1YMR264W SAS10Q12136 610 aaPredicted RBP17.91■□□□□ 0.46
CUE1YMR264W TY1B-BRQ12193 1756 aa17.87■□□□□ 0.45
CUE1YMR264W TY1B-GR3Q12316 1755 aa17.87■□□□□ 0.45
CUE1YMR264W TY1B-ORQ92393 1755 aa17.87■□□□□ 0.45
CUE1YMR264W TY1B-HO13535 1793 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-DR5P0C2I2 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-DR6P0C2I3 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-LR2P0C2I5 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-LR3P0C2I6 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W TY1B-PR1P0C2I9 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W TY1B-PR2P0C2J0 1756 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-PR3P0C2J1 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W TY1B-JR1P47098 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-ML2Q03434 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W TY1B-ER1Q03612 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-ML1Q04711 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W TY1B-GR2Q12269 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-OLQ12273 1755 aa17.85■□□□□ 0.45
CUE1YMR264W TY1B-PLQ12414 1755 aaKnown RBP17.85■□□□□ 0.45
CUE1YMR264W SNQ2P32568 1501 aaKnown RBP17.8■□□□□ 0.44
CUE1YMR264W RSE1Q04693 1361 aaKnown RBP17.79■□□□□ 0.44
CUE1YMR264W CDC25P04821 1589 aa17.78■□□□□ 0.44
CUE1YMR264W RQC2Q12532 1038 aaKnown RBP17.76■□□□□ 0.43
CUE1YMR264W SPP41P38904 1435 aa17.75■□□□□ 0.43
CUE1YMR264W MLP2P40457 1679 aa17.72■□□□□ 0.43
CUE1YMR264W STH1P32597 1359 aa17.72■□□□□ 0.43
CUE1YMR264W TAF7Q05021 590 aa17.69■□□□□ 0.42
CUE1YMR264W PAN1P32521 1480 aa17.66■□□□□ 0.42
CUE1YMR264W VTH1P40438 1549 aa17.64■□□□□ 0.41
CUE1YMR264W VTH2P40890 1549 aa17.64■□□□□ 0.41
CUE1YMR264W TSC11P40061 1430 aa17.62■□□□□ 0.41
CUE1YMR264W PDR15Q04182 1529 aaKnown RBP17.62■□□□□ 0.41
CUE1YMR264W ESC1Q03661 1658 aaKnown RBP17.61■□□□□ 0.41
CUE1YMR264W ULS1Q08562 1619 aa17.58■□□□□ 0.4
CUE1YMR264W TY1B-JR2P47100 1755 aaKnown RBP17.56■□□□□ 0.4
CUE1YMR264W TY1B-ER2Q03619 1755 aa17.56■□□□□ 0.4
CUE1YMR264W TY1B-MR1Q04214 1755 aa17.56■□□□□ 0.4
CUE1YMR264W TY1B-MR2Q04670 1755 aaKnown RBP17.56■□□□□ 0.4
CUE1YMR264W TY1B-LR1Q12088 1755 aaKnown RBP17.56■□□□□ 0.4
CUE1YMR264W TY1B-NL1Q12112 1755 aa17.56■□□□□ 0.4
CUE1YMR264W TY1B-GR1Q12141 1755 aa17.56■□□□□ 0.4
CUE1YMR264W TY1B-BLQ12490 1755 aa17.56■□□□□ 0.4
CUE1YMR264W TRM732Q03496 1420 aa17.55■□□□□ 0.4
CUE1YMR264W MTC1P47018 478 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms