RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W SPA2P23201 1466 aaKnown RBP7.59□□□□□ -1.19
PEP5YMR231W INO80P53115 1489 aa7.45□□□□□ -1.22
PEP5YMR231W SGS1P35187 1447 aa7.39□□□□□ -1.23
PEP5YMR231W SSN2P38931 1420 aa7.29□□□□□ -1.24
PEP5YMR231W TCB3Q03640 1545 aaKnown RBP7.13□□□□□ -1.27
PEP5YMR231W SKI3P17883 1432 aaKnown RBP7.09□□□□□ -1.27
PEP5YMR231W TY1B-DR4Q07793 1604 aa7.08□□□□□ -1.28
PEP5YMR231W CHD1P32657 1468 aa7.01□□□□□ -1.29
PEP5YMR231W SIN3P22579 1536 aa6.88□□□□□ -1.31
PEP5YMR231W HSL1P34244 1518 aa6.86□□□□□ -1.31
PEP5YMR231W SPT6P23615 1451 aaKnown RBP6.84□□□□□ -1.31
PEP5YMR231W XRN1P22147 1528 aaKnown RBP6.8□□□□□ -1.32
PEP5YMR231W THO2P53552 1597 aaKnown RBP6.8□□□□□ -1.32
PEP5YMR231W DRS1P32892 752 aaKnown RBP6.79□□□□□ -1.32
PEP5YMR231W HIR3P47171 1648 aa6.75□□□□□ -1.33
PEP5YMR231W SSK2P53599 1579 aa6.74□□□□□ -1.33
PEP5YMR231W MMS22Q06164 1454 aa6.71□□□□□ -1.34
PEP5YMR231W REV3P14284 1504 aa6.68□□□□□ -1.34
PEP5YMR231W MON2P48563 1636 aaPredicted RBP6.67□□□□□ -1.34
PEP5YMR231W MYO2P19524 1574 aaKnown RBP6.66□□□□□ -1.34
PEP5YMR231W NUP170P38181 1502 aa6.64□□□□□ -1.35
PEP5YMR231W ESP1Q03018 1630 aa6.63□□□□□ -1.35
PEP5YMR231W POL1P13382 1468 aa6.61□□□□□ -1.35
PEP5YMR231W UFD4P33202 1483 aa6.6□□□□□ -1.35
PEP5YMR231W STU1P38198 1513 aa6.6□□□□□ -1.35
PEP5YMR231W SWR1Q05471 1514 aa6.6□□□□□ -1.35
PEP5YMR231W ECM5Q03214 1411 aa6.59□□□□□ -1.36
PEP5YMR231W YPK9Q12697 1472 aa6.53□□□□□ -1.36
PEP5YMR231W MYO4P32492 1471 aa6.53□□□□□ -1.36
PEP5YMR231W YTA7P40340 1379 aa6.5□□□□□ -1.37
PEP5YMR231W ATG2P53855 1592 aa6.48□□□□□ -1.37
PEP5YMR231W YOR1P53049 1477 aa6.46□□□□□ -1.38
PEP5YMR231W DNA2P38859 1522 aa6.45□□□□□ -1.38
PEP5YMR231W SPP41P38904 1435 aa6.45□□□□□ -1.38
PEP5YMR231W TAF2P23255 1407 aa6.43□□□□□ -1.38
PEP5YMR231W BUD4P47136 1447 aa6.43□□□□□ -1.38
PEP5YMR231W SMC4Q12267 1418 aa6.41□□□□□ -1.38
PEP5YMR231W RPO31P04051 1460 aa6.4□□□□□ -1.38
PEP5YMR231W TRM732Q03496 1420 aa6.4□□□□□ -1.38
PEP5YMR231W PEP1P32319 1579 aa6.4□□□□□ -1.39
PEP5YMR231W IKI3Q06706 1349 aaKnown RBP6.38□□□□□ -1.39
PEP5YMR231W RKR1Q04781 1562 aa6.37□□□□□ -1.39
PEP5YMR231W SCC2Q04002 1493 aa6.37□□□□□ -1.39
PEP5YMR231W TY1B-DR3Q99231 1755 aa6.36□□□□□ -1.39
PEP5YMR231W MLP2P40457 1679 aa6.35□□□□□ -1.39
PEP5YMR231W PDR10P51533 1564 aa6.34□□□□□ -1.39
PEP5YMR231W BPT1P14772 1559 aa6.33□□□□□ -1.4
PEP5YMR231W TOP2P06786 1428 aaKnown RBP6.33□□□□□ -1.4
PEP5YMR231W YCF1P39109 1515 aaKnown RBP6.33□□□□□ -1.4
PEP5YMR231W TY2B-LR1P0C2J3 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-FP0CX63 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-GR2P0CX64 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-CP25384 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-DR2Q03494 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY1B-DR1Q03855 1755 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-DR3Q07791 1770 aaKnown RBP6.33□□□□□ -1.4
PEP5YMR231W TY2B-OR1Q12113 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-DR1Q12472 1770 aa6.33□□□□□ -1.4
PEP5YMR231W TY2B-OR2Q12501 1770 aa6.33□□□□□ -1.4
PEP5YMR231W RSE1Q04693 1361 aaKnown RBP6.32□□□□□ -1.4
PEP5YMR231W SNQ2P32568 1501 aaKnown RBP6.31□□□□□ -1.4
PEP5YMR231W TY2B-BQ12491 1770 aa6.29□□□□□ -1.4
PEP5YMR231W PDR5P33302 1511 aaKnown RBP6.29□□□□□ -1.4
PEP5YMR231W ULS1Q08562 1619 aa6.28□□□□□ -1.4
PEP5YMR231W KOG1P38873 1557 aa6.28□□□□□ -1.4
PEP5YMR231W TY1B-HO13535 1793 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-DR5P0C2I2 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-DR6P0C2I3 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-LR2P0C2I5 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-LR3P0C2I6 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W TY1B-PR1P0C2I9 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W TY1B-PR2P0C2J0 1756 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-PR3P0C2J1 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W TY1B-JR1P47098 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-ML2Q03434 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W TY1B-ER1Q03612 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-ML1Q04711 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W TY1B-GR2Q12269 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-OLQ12273 1755 aa6.26□□□□□ -1.41
PEP5YMR231W TY1B-PLQ12414 1755 aaKnown RBP6.26□□□□□ -1.41
PEP5YMR231W ESC1Q03661 1658 aaKnown RBP6.24□□□□□ -1.41
PEP5YMR231W TAF7Q05021 590 aa6.24□□□□□ -1.41
PEP5YMR231W TY1B-BRQ12193 1756 aa6.22□□□□□ -1.41
PEP5YMR231W TY1B-GR3Q12316 1755 aa6.22□□□□□ -1.41
PEP5YMR231W TY1B-ORQ92393 1755 aa6.22□□□□□ -1.41
PEP5YMR231W TY3B-GQ99315 1547 aa6.21□□□□□ -1.41
PEP5YMR231W MDS3P53094 1487 aa6.2□□□□□ -1.42
PEP5YMR231W IRC20Q06554 1556 aa6.2□□□□□ -1.42
PEP5YMR231W YBT1P32386 1661 aa6.2□□□□□ -1.42
PEP5YMR231W PDR15Q04182 1529 aaKnown RBP6.19□□□□□ -1.42
PEP5YMR231W SNT2P53127 1403 aa6.19□□□□□ -1.42
PEP5YMR231W STH1P32597 1359 aa6.18□□□□□ -1.42
PEP5YMR231W NOP2P40991 618 aaKnown RBP6.17□□□□□ -1.42
PEP5YMR231W GCN2P15442 1659 aa6.16□□□□□ -1.42
PEP5YMR231W GEA1P47102 1408 aaPredicted RBP6.15□□□□□ -1.42
PEP5YMR231W TY1B-JR2P47100 1755 aaKnown RBP6.15□□□□□ -1.42
PEP5YMR231W TY1B-ER2Q03619 1755 aa6.15□□□□□ -1.42
PEP5YMR231W TY1B-MR1Q04214 1755 aa6.15□□□□□ -1.42
PEP5YMR231W TY1B-MR2Q04670 1755 aaKnown RBP6.15□□□□□ -1.42
PEP5YMR231W TY1B-LR1Q12088 1755 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms